|
Name : rplS (PGTDC60_0036) Accession : YP_004508772.1 Strain : Porphyromonas gingivalis TDC60 Genome accession: NC_015571 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 43855 - 44220 bp Length : 366 bp Strand : + Note : similar to RefSeq{20100916}, gi|188993899|ref|YP_001928151.1| 50S ribosomal protein L19 [Porphyromonas gingivalis ATCC 33277]|, percent identity 100 in 121 aa, BLASTP E(): 9e-62 DNA sequence : ATGGATTTTATTAAAATCGTTAACGAAGAGTTCAAATCAGGGAAAGAACATCCCAAGTTTAACAGCGGTGACACCATCAC TGTTGAATATCGTATCAAGGAGGGTAACAAGGAGCGTATCCAGAAGTATCGCGGTGTAGTAATACGCATCAGCGGCCACG GCGACAAGAAGCGATTCACTGTTCGCAAAATATCGGACGGTATCGGTGTAGAGCGTATTTTCCCGATCGAAAGCCCTTTC ATCGAAAACATTACCGTTGAGAAGTATGGTAAGGTACGTCGAGCCAAACTATATTACCTGCGTGGCCTTACAGGCAAGAA AGCCCGTATCAAAGAGCGTCGCGTAGCTCTTTCTTCTAAAGACTAA Protein sequence : MDFIKIVNEEFKSGKEHPKFNSGDTITVEYRIKEGNKERIQKYRGVVIRISGHGDKKRFTVRKISDGIGVERIFPIESPF IENITVEKYGKVRRAKLYYLRGLTGKKARIKERRVALSSKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 1e-21 | 53 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 6e-21 | 51 |
