Gene Information

Name : umuD (PGTDC60_2135)
Accession : YP_004510840.1
Strain : Porphyromonas gingivalis TDC60
Genome accession: NC_015571
Putative virulence/resistance : Unknown
Product : umuD protein
Function : -
COG functional category : K : Transcription
COG ID : COG1974
EC number : -
Position : 2209956 - 2210381 bp
Length : 426 bp
Strand : -
Note : similar to RefSeq{20100916}, gi|34541026|ref|NP_905505.1| umuD protein [Porphyromonas gingivalis W83]|, percent identity 99.3 in 141 aa, BLASTP E(): 4e-77

DNA sequence :
ATGATAGATTTATTTCAGATCGATACAGGATCTTCTCTGCTTCTACCATTCGCAGATGAAGGTATTCGCGCGGGATTTCC
CTCTCCTGCACAGGACTATATGGATATTGCCATTGACCTGAATCATGAGTTGATAACTCACCCATACAGCACGTTCTACG
GAAGAGTAAAGGGCAATTCAATGGAAGATGCCCATGTGTTCGACGGCGATATTCTTGTTATAGACAAGTCCCTTGAACCG
CGGGATGGCGATATGGCTGTCTGCTTTTTGGATGGAGAATTTACCCTGAAAACAATCCGCATCAAATCGGAAGAGATTCT
ACTCGAACCGGCCAACCCCGACTATCCTACCATACATGTATCGGCAGACAACGATTTCGTCATCTGGGGCATCGTAACCT
ATTGTATTCACAAAATAAGAAGATGA

Protein sequence :
MIDLFQIDTGSSLLLPFADEGIRAGFPSPAQDYMDIAIDLNHELITHPYSTFYGRVKGNSMEDAHVFDGDILVIDKSLEP
RDGDMAVCFLDGEFTLKTIRIKSEEILLEPANPDYPTIHVSADNDFVIWGIVTYCIHKIRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t06650 YP_006892470.1 hypothetical protein Not tested SPI-7 Protein 9e-12 41