Gene Information

Name : PGTDC60_1810 (PGTDC60_1810)
Accession : YP_004510525.1
Strain : Porphyromonas gingivalis TDC60
Genome accession: NC_015571
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1879665 - 1880324 bp
Length : 660 bp
Strand : +
Note : similar to RefSeq{20100916}, gi|188994585|ref|YP_001928837.1| putative ABC transporter ATP-binding protein [Porphyromonas gingivalis ATCC 33277]|, percent identity 100 in 219 aa, BLASTP E(): 1e-123

DNA sequence : 
ATGATTGAAATCAGCAACCTCACCAAGGTTTTCAGAACAGAAGAAATAGAGACGGTAGCCCTCGATGGCGTATCGCTCAA
AGTGGACAAAGGCGAATTTATCGCCATAATGGGGCCTTCGGGATGCGGTAAGTCCACCCTGCTCAATATCCTCGGCCTTC
TCGACAATCCCACTTCCGGTATCTACAAGCTCGATGGGGCAGAAGTGGGCAACCTCCGGGAAAAAGACAGGACTGCCGTC
CGTAAGGGCAATATCGGCTTCGTATTCCAGAGCTTCAACCTCATCGAAGAGATGACGGTAAGCGAGAACGTGGAGTTGCC
GCTCGTCTATCTCGGTGTGAAGGCCTCCGAGCGGAAAGAGCGAGTGGAGGAGGCTCTGCGCAAGATGAGCATCAGCCACC
GAGCCGGCCACTTCCCCAATCAGCTCTCCGGAGGACAACAGCAGCGCGTGGCTATCGCCCGTGCCGTGGTGGCCAATCCG
AAGCTCATCCTCGCCGATGAACCTACGGGTAACCTCGACTCCAAAAACGGAGCCGATGTCATGGAACTGCTCAGAGGTCT
CAATCGCGAAGGTGCAACCATCGTCATGGTGACGCACTCCGAGCACGATGCACGTAGTGCCGGCCGCATCATCAATCTGT
TCGACGGTAAGATTCGCTAA

Protein sequence : 
MIEISNLTKVFRTEEIETVALDGVSLKVDKGEFIAIMGPSGCGKSTLLNILGLLDNPTSGIYKLDGAEVGNLREKDRTAV
RKGNIGFVFQSFNLIEEMTVSENVELPLVYLGVKASERKERVEEALRKMSISHRAGHFPNQLSGGQQQRVAIARAVVANP
KLILADEPTGNLDSKNGADVMELLRGLNREGATIVMVTHSEHDARSAGRIINLFDGKIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-29 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PGTDC60_1810 YP_004510525.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-45 53
PGTDC60_1810 YP_004510525.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-40 49
PGTDC60_1810 YP_004510525.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-34 47
PGTDC60_1810 YP_004510525.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-31 46
PGTDC60_1810 YP_004510525.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 2e-27 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PGTDC60_1810 YP_004510525.1 ABC transporter ATP-binding protein VFG2059 Protein 5e-14 42
PGTDC60_1810 YP_004510525.1 ABC transporter ATP-binding protein VFG0869 Protein 3e-17 41