Gene Information

Name : smpB (PGTDC60_1619)
Accession : YP_004510334.1
Strain : Porphyromonas gingivalis TDC60
Genome accession: NC_015571
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1681870 - 1682331 bp
Length : 462 bp
Strand : +
Note : similar to RefSeq{20100916}, gi|188995334|ref|YP_001929586.1| SsrA-binding protein [Porphyromonas gingivalis ATCC 33277]|, percent identity 100 in 153 aa, BLASTP E(): 8e-83

DNA sequence :
ATGAAAGAGAAAATACAGAAGAATATCCTCATAAAGAACAAACGTGCCACTTTCGATTACGAGATTTTGGACGTTTACAC
GGCGGGCATTGTATTGGTCGGTACCGAGATCAAATCGCTCCGACTGGGCAAAGGCGGTTTGGTTGATACCTATTGCTACT
TCCATCGGGGAGAGCTGTGGGTGAAGAATATGTACATAGCCGAATACTTCTATGGCACCTATAACAACCATGTGGCTCGC
CGCGACCGTAAACTCCTGCTCAATCGCAAAGAGCTACGCAAGCTTGAGGAGGCATCCAAGAGCGTGGGTACCACGATAGT
GCCACTCAAGCTCTTTATCAATGAAAGGGGATTGGCCAAGCTGCAAATCGGATTGGCACGAGGGAAAAAACAATATGACA
AGCGTGCATCCATCAAAGAGCGAGATGATCGCCGAGAGATGGATCGTGCGTTGAAACGCTAA

Protein sequence :
MKEKIQKNILIKNKRATFDYEILDVYTAGIVLVGTEIKSLRLGKGGLVDTYCYFHRGELWVKNMYIAEYFYGTYNNHVAR
RDRKLLLNRKELRKLEEASKSVGTTIVPLKLFINERGLAKLQIGLARGKKQYDKRASIKERDDRREMDRALKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 6e-17 47
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-21 47