Gene Information

Name : PGTDC60_1395 (PGTDC60_1395)
Accession : YP_004510111.1
Strain : Porphyromonas gingivalis TDC60
Genome accession: NC_015571
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1443863 - 1444534 bp
Length : 672 bp
Strand : -
Note : similar to RefSeq{20100916}, gi|188995545|ref|YP_001929797.1| putative ABC transporter ATP-binding protein [Porphyromonas gingivalis ATCC 33277]|, percent identity 100 in 223 aa, BLASTP E(): 1e-128

DNA sequence : 
ATGGATGCAATCAAACTGACCAACGTGAGTCGCATCTTCCGTGCCGGCCTGATGGAAACGGCCGCTTTGGAGGATATCAA
CATCAGCGTAAACGGCGGCGAGTTCCTTTCCGTCATGGGACCGAGCGGATGCGGCAAGAGTACGCTCCTCAACGTCATGG
GTCTGCTGGACCGTCCTACCACGGGGACGGTGGAAATCCTCGGACAAACGGTACACTCCATGAACGACAAGGCTTTGGCC
GCTTTCCGCAATGAAAAGCTGGGATTCGTATTTCAGAGTTTTCATCTCGTCAATACGCTCAACGTGCTGGACAACGCCAT
GCTGCCGCTCCTCTATCGCCGCATGAGCGAAAGTAAAAGGAGGAAGGCGGCGTACGAAGTCCTCGAGCGCATGGAAATGA
CGCATCGGCTGCGCCATTATCCCCAACAGCTCTCCGGAGGTCAATGCCAACGCGTGGCCATTGCCCGCGCCATTGTAGGC
AATCCCGAGATTATCCTCGCCGACGAACCTACCGGTAACCTCGATTCCAAAATGGGGGCGGAAGTAATGAGTATCCTTCA
TCGGCTCAATACGGAGGACGGACGTACCATCGTCATGGTCACTCACAACGAATTGCAAGCCCGAGAGACGAGTCGGACCA
TCCGAATGTTCGATGGACATCAGGTGGGTTAA

Protein sequence : 
MDAIKLTNVSRIFRAGLMETAALEDINISVNGGEFLSVMGPSGCGKSTLLNVMGLLDRPTTGTVEILGQTVHSMNDKALA
AFRNEKLGFVFQSFHLVNTLNVLDNAMLPLLYRRMSESKRRKAAYEVLERMEMTHRLRHYPQQLSGGQCQRVAIARAIVG
NPEIILADEPTGNLDSKMGAEVMSILHRLNTEDGRTIVMVTHNELQARETSRTIRMFDGHQVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PGTDC60_1395 YP_004510111.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-48 55
PGTDC60_1395 YP_004510111.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-36 47
PGTDC60_1395 YP_004510111.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-36 43
PGTDC60_1395 YP_004510111.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-34 43