Gene Information

Name : ctfA (PGTDC60_1142)
Accession : YP_004509865.1
Strain : Porphyromonas gingivalis TDC60
Genome accession: NC_015571
Putative virulence/resistance : Unknown
Product : butyrate-acetoacetate CoA-transferase subunit A
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : -
Position : 1184206 - 1184850 bp
Length : 645 bp
Strand : -
Note : similar to RefSeq{20100916}, gi|188995026|ref|YP_001929278.1| putative CoA transferase subunit A [Porphyromonas gingivalis ATCC 33277]|, percent identity 99.5 in 214 aa, BLASTP E(): 1e-120

DNA sequence :
ATGAATAAAGCGATTTCGGCTGAAAAGTTGTCCGCCTTGTTTAAGGACAGTATGACTATCATGGTGGGTGGCTTCTTAGC
GAATGGTACCCCCGAAAGGATTATCGATGAACTAGTAAAAAGCGGTGTCAAGGATCTCACTCTTATTGCCAACGACACGT
CCTATCCTGATCGTGGTTGTGGTCGGCTCATTGCAAACCATCAGGTGAAGAAGTTGATAGCTTCTCACATAGGTACGAAC
CCCATGACCGGTGACCAAATGAATACAGGTGAGTTGGTAATCGAGTTTAGTCCTCAGGGTACTCTTGCAGAGAGAGTACG
AGCAGGAGGAGCCGGCTTGGGAGGAGTATTGACCCCTACAGGGCTTGGGACGGTAATCGAAGAAGGTAAACAGAAGATCG
AGATTGATGGCGAGGTTTTTTTGCTCGAAAAACCTATCCGTGCCGACTTTGCCTTTATCAAGGGAAGTGTTGGCGATGAA
TTTGGGAATCTCATCTATAAAGGCACAACACAGAACTTCCAGCCCCTGATGGCAATGGCAGCAGACTGTGTAGTGGCAGA
AATCGAAGAAATCCACCCCATCGGACAGATCCCCATGGAACAAATCCATACCAGCGGCATATTCGTGGACTATATCCTCC
GCTAA

Protein sequence :
MNKAISAEKLSALFKDSMTIMVGGFLANGTPERIIDELVKSGVKDLTLIANDTSYPDRGCGRLIANHQVKKLIASHIGTN
PMTGDQMNTGELVIEFSPQGTLAERVRAGGAGLGGVLTPTGLGTVIEEGKQKIEIDGEVFLLEKPIRADFAFIKGSVGDE
FGNLIYKGTTQNFQPLMAMAADCVVAEIEEIHPIGQIPMEQIHTSGIFVDYILR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 3e-34 53