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Name : clpB (PGTDC60_1096) Accession : YP_004509819.1 Strain : Porphyromonas gingivalis TDC60 Genome accession: NC_015571 Putative virulence/resistance : Virulence Product : clpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1133483 - 1136113 bp Length : 2631 bp Strand : + Note : similar to RefSeq{20100916}, gi|34540850|ref|NP_905329.1| clpB protein [Porphyromonas gingivalis W83]|, percent identity 99.9 in 863 aa, BLASTP E(): 0 DNA sequence : ATGGATGTTGGATTCTGTCTGGTAACAACAAACACAGCAATGAACATTAACAACTACACAATCAAATCGCAGGAGGCTCT ACAGCAGGCTGTGGAGCTGACCCGTCGGCACGGACAGCAGGCCATCGAACCGCAGCACCTGCTCAAGGCCGTTATGGATC AGGGCGAAAGCCTGACCGATTTCCTTTTTGCCAAGATGGGGCTGAACAAGGGCAGTATCGCCACGGCTGTGGACAAACTG ATAGAGAAACTGCCCCATGTATCGGGTGGCGAACCCTATCTGTCGCATGAGACCAATCAGGTGCTACAGGCAGCGGAGGA CGCAGCGCACCGGATGAAGGACAAATACGTCTCTTTGGAGCACATCGTGCTGGCTATTCTGACTACGCGATGCGAGGCGT CCACTCTGCTCAAGGATGCCGGAGCCACCGAACAGCTTCTGCAGTCGGCCATCGAAGAGCTTCGGAAGGGGCGCAACGTG ACCAGTCAGAGTGCGGAGGAACAGTACAATGCACTGGAGAAATATGCCGTCAATCTCTGTCAGCGTGCTCGCGATGGCAA GTTGGATCCCGTGATCGGTCGCGATGACGAGATCAGGCGAGTGCTGCAAATTCTCTCTCGACGCACCAAGAACAATCCTA TCCTTATCGGTGAGCCGGGGGTGGGCAAGACAGCCATAGCCGAGGGCTTGGCTTACAGGATCGTGCGTGGCGACGTGCCG GAGAATCTGCGCAACAAGCAGATATTCTCTCTCGACATGGGTGCCTTGATCGCCGGAGCCAAATACAAAGGTGAATTCGA GGAAAGGCTGAAAGCCGTGGTAAACGAAGTGACCGGTGCCGAGGGGGAAATCATCCTTTTCATAGATGAGATCCACACCC TTGTCGGAGCCGGCAAGAGCGAAGGCGCAATGGATGCGGCCAACATACTGAAGCCGGCCCTGGCTCGGGGCGAACTCCGT GCCATCGGTGCCACCACGCTGGACGAATACCGCAAATACTTCGAGAAGGACAAGGCTCTGGAACGACGCTTCCAGATGGT GATGGTGGACGAGCCGGACGAGCTAAGCTCCATCTCCATCCTCCGGGGTTTGAAGGAGAAATACGAGAATCACCACAAAG TGCGGATCAAGGATGATGCCATCATTGCGGCCGTGAAGTTGTCGCACCGCTACATTACGGAGCGGTTCCTGCCCGACAAG GCCATCGACCTGATGGATGAGGCTGCGGCTCGTCTGCGTATGGAAGTGGATTCGCTGCCGGAGGAGCTGGACGAGATCTC GCGCAGGATCAAGCAACTTGAGATCGAACGCGAAGCCATCAAGCGAGAGAATGACGAGGAGAAGGTACAGTTCCTCGACA GGGAAATAGCCGAACTCAAGGAGAAAGAGGCCTCGGAGAAAGCCCAATGGCAGAACGAAAAAGATCGGATCAATCAGATT CAGCAGCTCAAGATAGATATAGAGGAGCTGAAGTTTCAGGCCGATCGTGCCGAACGGGAGGGCGATTACGGACGAGTAGC CGAGATACGCTACGGACTCATCAAGCAGAAAGAGACGGAGATCGACACGATACAGCAACAGCTGCACGAATTGCAGCGTG GCGGCTCCATGATCAAGGAGGAAGTGGAGGCCGACGACATAGCCGACATCGTGTCGCGCTGGACGGGTATCCCCGTCAGC CGCATGCTCCAGAGCGAGCGCGACAAGCTGCTTCATCTGGAGGACGAGCTGCACAAGCGCGTGATCGGTCAGGACGAAGC CATCCGTGCCGTGGCCGATGCCGTCCGTCGCAGCCGGGCAGGCCTTCAGGATCCCAAGCGTCCGATCGGTTCGTTCATCT TCCTCGGTACTACGGGGGTGGGCAAGACGGAGTTGGCACGTGCCTTGGCCGAATTGCTCTTCGATGATGAGAGCATGCTT ACGCGAATAGACATGAGCGAGTATCAGGAGAAGTTCAGTGCCACGCGTCTGATCGGTGCGCCTCCGGGGTATGTGGGCTA TGACGAGGGTGGCCAATTGACGGAAGCCATTCGCCGCAAGCCTTATTCCGTGGTGCTTTTCGATGAAATAGAAAAAGCTC ACCCGGATGTGTTCAACGTATTGCTGCAAGTCCTCGACGATGGCCGCCTGACCGACAACAAGGGGCATGTGGTAAACTTC AAGAATACGCTCATCATCATGACGTCGAACCTCGGTTCGGACATCATTCGCGAGCGGATGCAGAACCTCACGGCGGAGAA TCGCCGGTCCCTCACGGCCCGGACGGCCGATGAGGTGATGCAGCTACTCAAGCATACGATCCGCCCCGAGTTTCTGAACC GTATCGACGAGACCATAGTCTTCACGCCACTGACCGAGCAGGAGATCTACGAGATCGTCCGCTTGCAGCTCGATGGTATC GTGCGCCAACTGGCCGATAACGACGTGGTGCTCCACTATACGGAGGCTGTCGTGACCTTTGCCGCTCGCGAGGGATATGA TCCGCAGTTCGGAGCGCGTCCTGTGAAGCGAGTCCTGCAGCGATTCGTCCTCAACGAGCTGAGCAAGGCACTCTTGGCCG ATACGGTGGACAGTACACGTCCCGTCCTCATCGATTGCATAGACGGATCAATCGTCTTCCGCAACGAATAG Protein sequence : MDVGFCLVTTNTAMNINNYTIKSQEALQQAVELTRRHGQQAIEPQHLLKAVMDQGESLTDFLFAKMGLNKGSIATAVDKL IEKLPHVSGGEPYLSHETNQVLQAAEDAAHRMKDKYVSLEHIVLAILTTRCEASTLLKDAGATEQLLQSAIEELRKGRNV TSQSAEEQYNALEKYAVNLCQRARDGKLDPVIGRDDEIRRVLQILSRRTKNNPILIGEPGVGKTAIAEGLAYRIVRGDVP ENLRNKQIFSLDMGALIAGAKYKGEFEERLKAVVNEVTGAEGEIILFIDEIHTLVGAGKSEGAMDAANILKPALARGELR AIGATTLDEYRKYFEKDKALERRFQMVMVDEPDELSSISILRGLKEKYENHHKVRIKDDAIIAAVKLSHRYITERFLPDK AIDLMDEAAARLRMEVDSLPEELDEISRRIKQLEIEREAIKRENDEEKVQFLDREIAELKEKEASEKAQWQNEKDRINQI QQLKIDIEELKFQADRAEREGDYGRVAEIRYGLIKQKETEIDTIQQQLHELQRGGSMIKEEVEADDIADIVSRWTGIPVS RMLQSERDKLLHLEDELHKRVIGQDEAIRAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELARALAELLFDDESML TRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNVLLQVLDDGRLTDNKGHVVNF KNTLIIMTSNLGSDIIRERMQNLTAENRRSLTARTADEVMQLLKHTIRPEFLNRIDETIVFTPLTEQEIYEIVRLQLDGI VRQLADNDVVLHYTEAVVTFAAREGYDPQFGARPVKRVLQRFVLNELSKALLADTVDSTRPVLIDCIDGSIVFRNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-109 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-100 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-100 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_004509819.1 | clpB protein | VFG2076 | Protein | 7e-124 | 44 |
| clpB | YP_004509819.1 | clpB protein | VFG2084 | Protein | 8e-108 | 42 |
