Gene Information

Name : SerAS9_0843 (SerAS9_0843)
Accession : YP_004504256.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1629
EC number : -
Position : 941174 - 943369 bp
Length : 2196 bp
Strand : -
Note : KEGG: spe:Spro_0918 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug

DNA sequence :
ATGAAACGCAAACACCTTTGGGTATTGAACCCTTGCCTGCTGGCGATGCTTGCGCCGGCGGCCTGGGCAGAAGAACAAAA
AAGCGAAGATCAAATGGTGGTATCCGCCAGCCGCTCGCACCGTAGCGTGGCAGAGATGGCGCAAACCACCTGGGTGATTG
AAAGCCAGGAAATTGAGCAACAGGTTCAGGGCGGCAAGGAAATCAAAGATATCCTGGCGCAACTGATCCCAGGCATGGAT
GTCAGCAGTCAGGGCCGCACCAACTACGGCATGAACATGCGCGGCCGTTCGATGATGGTGATGATCGACGGCGTGCGTTT
GAACTCTTCGCGCAGCGACAGCCGCCAGTTGGATTCCATCGATCCGTTCAACATCGAGCACATTGAGGTGATTTCCGGCG
CCACCTCGCTGTATGGCGGCGGCAGCACCGGCGGCCTGATCAACATCGTCACCAAGAAAGGGCAAAAAGAGAAACAGGTT
GAGCTGCAGGTGGGCGGAAAAACCGGTTTCGGCGGCCATAACGATCACGACGAGAATGTGTCGGCGGCGGTCAGCGGCGG
CAACGATAACGCTTCGGGCCGCCTGTCGGTCTCCTATCAGCGTTACGGCGGCTGGTACGACGGCAAAGGCAATGAGGTGT
TGATTGATAACACCCAAACCGGGCTGCAATATTCCGATCGCATCGACGTAATGGGTACCGGCACCATTAACATTGACGAT
CACCAGCAGTTGCAGGTGACGACGCAGTATTTCAACAGCGAGTCAGACGGCAAGCACGGCCTGTATCTGGGGCAAAATTT
CTCGGCCGTGACCGGTGCGGGCCAGGCCTCCAACGGCAGCAACCTGAATTCGGACCGTATACCGGGCACCGAACGTCACC
TGATTAACCTGCAATATTCCAACACCGATTTCTGGGGACAGGATTTGGTGGCGCAGGTCTATTATCGCGACGAGTCGCTG
ACCTTCTACCCGTTCCCGACGCTGGCTAGCGGCAAGGTCACCAGCATCGGTGCCTCACAGCAGAAGACCGATTTTTACGG
CGGCAAACTGACGCTGAACAGCAAGCCGATTGACGCTCTGACGCTGACTTACGGCGTCGACGCCGAGCATGAAAGCTTCA
ACGCCAACCAGCAGTTCTTCAATCTGGCCAAAGCGCAGCAGTCCGGCGGGATGGCGCTGGAAAATGCCTATAACGTCGGC
CGCTATCCGGGCTATACCACCACCAACCTGGCGCCGTTCCTGCAGGCCAGCTATGACATCGACCCGATGTTTACCCTCAG
CGGTGGTGTACGTTATCAATACACCGAGAACAAGGTGGACGACTTTGTCGGCTATGCGCAGCAACAAGGGATCGCCAATG
GTCTGGCGAGCTCCGCCGATGCGGTGCCAGGCGGCAAAACCGACTACAACAACGCCTTGTTCAACGCCGGTTTACTGGTG
CACCTGACCGAGCGTCAGCAAGCATGGATCAACTTCTCGCAAGGCTTTGAGATCCCGGATCTGGCGAAGTACTACGGTTC
GGGTACTTATAAGCTGGTCAACGGGCATTATCAGTTGCAGAAAAGCGTCAACGTTAATGACTCCAAACTGGAAGGCATCA
AGGTTAACGCCTACGAGTTGGGCTGGCGCTACACCGGCGATAACTTGCGTACCCAGGTCGCTGCCTATTACTCGCTGTCG
GATAAAACCATCTCGATCAACAAAACCGACATGACCATCAACCTGGATTCGGATAAACGCCGGATTTACGGGGTGGAAGG
TGCGGTGGATTACTTCTTCGATAACAGCGAATGGAGCACCGGCACCACCTTTAACCTGATCAAATCGGAAACCAAAACCG
ACGGCAAGTGGGAAAAGCTGACGGTCGACACCGCCAGCCCGTCGAAAGCCACCGCCTACGTCAATTGGGCTCCGGGCGAT
TGGAATCTTCGCATGCAGTCGCAGCAAACCTTCGACGTATCGGATGCCGACGGCAATAAAATCAACGGTTACAACACCCT
CGATTTCCTCGGCAGCTACGCTTTGCCGGTGGGGAAAGTCAGCTTCAGCGTGGAAAACCTGCTGGACAAGAATTACACCA
CCGTCTGGGGCCAGCGCGCGCCGATCCTTTACAGCCCAACCTACGGCTCACCAGAGCTGTACAGCTATAAAGGCCGTGGC
CGCACCTTTGGCCTGAACTACTCAGTGCTGTTCTGA

Protein sequence :
MKRKHLWVLNPCLLAMLAPAAWAEEQKSEDQMVVSASRSHRSVAEMAQTTWVIESQEIEQQVQGGKEIKDILAQLIPGMD
VSSQGRTNYGMNMRGRSMMVMIDGVRLNSSRSDSRQLDSIDPFNIEHIEVISGATSLYGGGSTGGLINIVTKKGQKEKQV
ELQVGGKTGFGGHNDHDENVSAAVSGGNDNASGRLSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSDRIDVMGTGTINIDD
HQQLQVTTQYFNSESDGKHGLYLGQNFSAVTGAGQASNGSNLNSDRIPGTERHLINLQYSNTDFWGQDLVAQVYYRDESL
TFYPFPTLASGKVTSIGASQQKTDFYGGKLTLNSKPIDALTLTYGVDAEHESFNANQQFFNLAKAQQSGGMALENAYNVG
RYPGYTTTNLAPFLQASYDIDPMFTLSGGVRYQYTENKVDDFVGYAQQQGIANGLASSADAVPGGKTDYNNALFNAGLLV
HLTERQQAWINFSQGFEIPDLAKYYGSGTYKLVNGHYQLQKSVNVNDSKLEGIKVNAYELGWRYTGDNLRTQVAAYYSLS
DKTISINKTDMTINLDSDKRRIYGVEGAVDYFFDNSEWSTGTTFNLIKSETKTDGKWEKLTVDTASPSKATAYVNWAPGD
WNLRMQSQQTFDVSDADGNKINGYNTLDFLGSYALPVGKVSFSVENLLDKNYTTVWGQRAPILYSPTYGSPELYSYKGRG
RTFGLNYSVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 66
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 66
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 66
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 66
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS9_0843 YP_004504256.1 TonB-dependent siderophore receptor VFG0619 Protein 0.0 66
SerAS9_0843 YP_004504256.1 TonB-dependent siderophore receptor VFG1085 Protein 0.0 66
SerAS9_0843 YP_004504256.1 TonB-dependent siderophore receptor VFG0936 Protein 0.0 66