Gene Information

Name : SerAS9_0560 (SerAS9_0560)
Accession : YP_004503976.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradation operon regulator HpaR
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 627272 - 627724 bp
Length : 453 bp
Strand : -
Note : TIGRFAM: Homoprotocatechuate degradation transcriptional regulator HpaR; PFAM: HTH transcriptional regulator, MarR; KEGG: spe:Spro_0624 MarR family transcriptional regulator; SMART: HTH transcriptional regulator, MarR

DNA sequence :
ATGCATGAATCCTTAACCATTGCCCTGTTGCAGGCGCGTGAAACCGCCATGGGGTTTTTCCGCCCGATCCTGAAAAGCCA
CAATCTGACGGAACAGCAGTGGCGCATCATCCGCGTGCTGGCCAACAGCCGTTCGATTGAATTCCACGAACTGGCGGCGG
AGACCTGCATCCTGCGCCCCAGCCTGACCGGCATTTTGTCGCGCATGGAGCGCGATAAGCTGATTTTCCGCCTGAAGCCG
GTCAACGATCAGCGCAAGCTGTACGTTTCGCTGACCCAGCCGGGCCAGGAGCTGTACGACGTGGCACGCCATCAGGTGGA
ACAGGGTTACCGCGAAATTGAAGCCGCGTTTTCGCAGCAGAAGATGGATCAACTGATGACGTTGCTGGACGAGCTGATCA
CCCTGGGCGACAAACTGCCGGCCAACGTGACGGCCCATCCCACCCAGAAATGA

Protein sequence :
MHESLTIALLQARETAMGFFRPILKSHNLTEQQWRIIRVLANSRSIEFHELAAETCILRPSLTGILSRMERDKLIFRLKP
VNDQRKLYVSLTQPGQELYDVARHQVEQGYREIEAAFSQQKMDQLMTLLDELITLGDKLPANVTAHPTQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 4e-51 77

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS9_0560 YP_004503976.1 homoprotocatechuate degradation operon regulator HpaR BAC0505 Protein 2e-32 51