Gene Information

Name : SerAS9_4957 (SerAS9_4957)
Accession : YP_004508310.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 5360908 - 5363022 bp
Length : 2115 bp
Strand : +
Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: spe:Spro_4871 ATP-dependent DNA helicase RecG; SMART: DEAD-like heli

DNA sequence :
ATGGTGGGCGACCATGCAGGCAACGGTACGCCGATGAAAGGCCGCCTGCTGGACGCCGTCGCTCTCACCACGCTTTCCGG
GGTTGGAGCCAGCCAAGCGGGCAAGCTGGCCAAAATTGGCCTGGAAACCATTCAGGACCTGCTGCTGCACCTCCCGCTGC
GTTATGAAGACCGCACCCGCCTTTATCCGATCAACGACCTGCTGCCGGGCATTTTTGCCACTGTGGAAGGCGAAGTGCTG
CGCAGCGATATCAGTTTTGGCCGTCGGCGTATGCTGACCTGCCAGATCAGCGACGGCACCGGCCTGCTCACCATGCGTTT
CTTTAACTTCAACGCAGCGATGAAAAACAGCCTGGCCGCAGGCCGCCGCGTAACCGCTTACGGTGAGATCAAACGCGGCA
ACCACGGCGCAGAAATCATCCACCCGGAATACCGCATTCAGGGGGAAAGCAGCGAGGTTGAACTGCAGGACTCACTGACG
CCGGTTTATCCGACCACAGAAGGCATCAGGCAGGCCACGCTGCGCAAGCTGACCGATCAGGCGCTGGAGCTGCTGGACAC
CTGCGCCATCGCCGAACTGCTGCCACCGGAACTCAGTGGCGGGCTGATGAGCCTGCCGCAGGCGCTGCACACCCTGCACC
GCCCGCCGCCGGATATTCAGTTGGAAGATTTGGAGCAGGGCAAGCATCCGGCGCAAAAACGCCTGATCCTGGAAGAGCTG
CTGGCGCATAACCTCAGCATGCTGGCAGTGCGCGCCGGTGCGCAGAGTTATCAGGCGCTGCCGCTGATGCCGGATGACCG
TCTGAAAAAACAATTTCTCGCCAAATTGCCGTTCTCGCCGACCGGCGCGCAAGATCGCGTAGTGGCCGATATCGAAGCCG
ATATGCAAAAAGGCTTCCCGATGATGCGGCTGGTGCAAGGTGATGTCGGCTCAGGTAAAACGCTGGTGGCCGCACTGGCG
GCGCTACGCGCCATCGCCCACGGCAAACAGGTGGCATTGATGGCGCCCACCGAACTGCTGGCCGAACAACACGCCAATAA
CTTCCGCCAGTGGTTTGAACCGCTGGGGCTTGAAGTGGGCTGGCTGGCCGGTAAGCAAAAAGGCAAGGCACGCCTTGCTC
AGCAGGAAGCGATCGCCAGCGGAAAAGTGTCGATGGTGGTCGGTACGCACGCCATATTCCAGGAACAGGTACAGTTTTCC
GGCCTGGCGCTGGTGATCATCGACGAACAGCACCGGTTTGGTGTGCACCAGCGGCTGGCTCTGTGGGAAAAGGGCGAGGA
GCAAGGCTTCCATGCCCACCAGTTGATCATGACCGCCACGCCAATCCCACGCACGCTGGCAATGACCGCCTATGCCGATC
TCGATACCTCGGTGATAGACGAACTGCCGCCAGGCAGGACGCCGGTCACCACCGTCGCCATTCCAGACACTCGGCGTGCC
GATATTATCCAGCGGGTAAAAAGCGCCTGTATGGAAGAAGGCCGGCAGGCGTACTGGGTCTGTACGCTGATCGAGGAATC
AGAGTTGCTGGAAGCGCAGGCGGCGGAAGCCACTTGGGAAGAATTGAAGACTGCACTGCCCGAACTGAAAGTCGCGCTGG
TTCACGGCCGCATGAAGGCGCAGGAAAAGCAGGCGGTAATGCAGGCCTTTAAACAGGGTGAGTTGCAGCTGTTGGTGGCA
ACCACAGTGATCGAAGTAGGCGTCGACGTACCGAACGCCAGTCTGATGATCATCGAAAACCCGGAGCGGCTTGGGTTGGC
GCAACTGCATCAGCTACGCGGCCGCGTTGGCCGTGGCGCAGTGGCATCGCATTGCGTGCTGTTGTACAAAACCCCGCTGA
GTAAAACTGCGCAGAAACGTCTGCAGGTTCTGCGCGACAGTAACGATGGCTTTGTGATTGCCCAGCGCGATCTGGAAATT
CGTGGCCCAGGCGAGCTGCTTGGGACGCGCCAGACCGGCAGTGCGGAGTTCAAGGTGGCCGATTTGCTGCGCGACCAGGC
GATGATACCGGAAGTGCAACGCGTCGCCCGTCATATTCATCAGCAGTACCCGGAACATGCCCGCGCCCTGATTGAACGCT
GGCTACCGGAGAAAGCGCGCTATTCCAACGCCTGA

Protein sequence :
MVGDHAGNGTPMKGRLLDAVALTTLSGVGASQAGKLAKIGLETIQDLLLHLPLRYEDRTRLYPINDLLPGIFATVEGEVL
RSDISFGRRRMLTCQISDGTGLLTMRFFNFNAAMKNSLAAGRRVTAYGEIKRGNHGAEIIHPEYRIQGESSEVELQDSLT
PVYPTTEGIRQATLRKLTDQALELLDTCAIAELLPPELSGGLMSLPQALHTLHRPPPDIQLEDLEQGKHPAQKRLILEEL
LAHNLSMLAVRAGAQSYQALPLMPDDRLKKQFLAKLPFSPTGAQDRVVADIEADMQKGFPMMRLVQGDVGSGKTLVAALA
ALRAIAHGKQVALMAPTELLAEQHANNFRQWFEPLGLEVGWLAGKQKGKARLAQQEAIASGKVSMVVGTHAIFQEQVQFS
GLALVIIDEQHRFGVHQRLALWEKGEEQGFHAHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRA
DIIQRVKSACMEEGRQAYWVCTLIEESELLEAQAAEATWEELKTALPELKVALVHGRMKAQEKQAVMQAFKQGELQLLVA
TTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQKRLQVLRDSNDGFVIAQRDLEI
RGPGELLGTRQTGSAEFKVADLLRDQAMIPEVQRVARHIHQQYPEHARALIERWLPEKARYSNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-97 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS9_4957 YP_004508310.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 60