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Name : SerAS9_4817 (SerAS9_4817) Accession : YP_004508171.1 Strain : Serratia plymuthica AS9 Genome accession: NC_015567 Putative virulence/resistance : Virulence Product : fimbrial biogenesis outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 5199552 - 5202095 bp Length : 2544 bp Strand : - Note : PFAM: Fimbrial biogenesis outer membrane usher protein; KEGG: eta:ETA_02610 MrfC protein DNA sequence : ATGGCGTTTTCTCTTACAGGGAAGTTGTTTCGTCTTCAGGCATTGGGATTATGTATTTCTCTGGCAGTGGGAAGTACCGC GCTTTATGCCGCTGAAGAGATTCAGTTCAATATGGATGTGCTGGATGTTAACGACAGGAAAAATATCGATCTGAGCCAGT TCTCCCGCGGCGGCTATATCATGCCGGGCGCCTATAGCATGGCGGTGCACATCAATAAAAACGAACTGCCGGAGGAGAAT ATCAATTTTTATGCCCCCGAGGATGACCCGAAAGGCAGCATGGCCTGCCTGTCGCCGGAATTGGTCGGGCAACTGGGATT AAAGGCAGATGCGACGAAAACGCTGACCTGGTGGCATCAGGACGCCTGCCTGAATATCGACAGCCTCAAAGGCATGGAAG TGCGGGCGGACCTGGCAACCTCGGCGCTGTACCTGAGCATTCCGCAGGTGTATCTGGAGTATTCGTCGCCGGACTGGGAT CCGCCGTCGCGCTGGGACGAAGGCATTCCGGGGCTGTTGTTTGATTACAACCTCAACGGCCAGACCCAGCATCAGCAGCG AGACGGTAGCCAGAGCTACAATCTCAGCGGCAACGGCACGGCGGGGGCCAACATGGGCGCGTGGCGTTTGCGGGCAGACT GGCAGGGGAACCTGGACCACCAGACCGGCAGCGGGCAGGGCACTAACCAGAAACTGGACTGGAGCCGCTACTACCTTTAC CGCGCCATCCCGGCCCTGCGCTCCAAACTGACGCTGGGGGAGGATTACCTCAACTCCGGCATGTTCGACAGCTTCCGCTT TACCGGGGCCAGCCTGGTGTCGGACGACAACATGCTGCCGCCGAACCTGCGCGGCTATGCGCCGGAAGTCGTCGGCATGG CCAAGACCAACGCCAAGGTCATCATCAGCCAGCAGGGGCGGGTGTTGTACGAGACCCAGGTGGCCGCCGGGCCGTTCCGC ATTCAGGACATCAACGATGCGGTGTCCGGCGAGCTGGACGTGCGGGTGGAAGAGCAGGACGGCAGCGTGCAGGAGTTCAC CATGAACACCTCCAATATTCCGTACCTGACGCGCCCGGGAGCGGTGCGCTTCAAGCTGGCGACGGGCAAGCCGTCCGATT GGCAGCATCACTCCCGCGGGCCGCTGTTCGGCACCGGGGAATTCTCCTGGGGGGTGAGCAACGGCTGGTCGTTGTACGGC GGTGCCCTGATGGGCGGCGATTATAACGCCCTGTCGCTGGGTATCGGCCGTGACCTGATGGCCTTCGGTGCGCTGTCCTT TGACGCCACCCAGTCGCGGGCGCGCATTCCGGCGGAGGATAGCACGCTGAGCGGCGGCTCGTACCGGGTGAGTTATTCGA AGACCTTCGATGAAATCGACAGCCAGGTGACCTTCGCCGGCTACCGTTTCTCGGAAGAGGACTTCATGAGCATGAGCGAA TACCTGGATGCGCGTTATTACGGCAGCCGGGTAGGCGGCAGCAAGGAGATGTATACCATCACCTTCAATAAGCAGTTCCG TGAACTGGGGCTCAGTACCTACCTGAACTACAGCCACCAGACGTACTGGAGCCGGTCGGACAATGACCGTTACAACCTGA CGATGTCGCGTTATTTCGATATTGGCCGCTTCAAGAACCTGAGCGTGTCGTTGTCGGCCTACCGCAACAAGTACAACGAG ACCAACGACGACGGCATGTACCTGTCGCTGTCGATGCCGTGGGGCAATGGCGGCAACGTCAGCTACAACACCACGGTGAA CCGTAACGACACCACCCACCGGGTGGGCTATTACGACCGGATTGACGAGAACAACAACTACCAGCTGGCCATGGGCACCT CGCGCAGCGGCGTCAACGCCAGCGGGTATTACAACCACAGCGGCGACATGGCCCGGGTGAGCGCCAACGCCAGCTATCAG GAAGGCCGTTACAGTGCGGTCGGTTTCTCCGCCCAGGGCGGGGCGACCCTGACGGCGGAAGGCGGTGCGCTGCACCGGGG CGGGGTGGCCGGCGGCACGCGCATGCTACTCGATACCGAGGGCGTGGCCGGTGTGCCGGTGCGCGGCTACGGCGCCACTT CGAAGACCAACGCCTGGGGCAAGGCGGTGGTGGCGGACGTGAACAGCTATTACCGCAACAAGGCCAGCATCGATTTGAAC AAGCTGGGCGATAACGCCGAGGCCACCAAATCGGTGGTGCAGGCCACCCTGACCGAAGGGGCGATTGGTTACCGCAAGTT TGGCGTGATTGCCGGTGAAAAAGCCATGGCCATCATCAAACTGGCGGACGGCAGCACGCCGCCGTTCGGCGCCACGGTGA CGAACAGCCGCAAGCAGGAAACCGGGATTGTCAACGACGGTGGCAGCGTCTACCTGAGCGGCATTAACGCCGGTGATCGG ATGACGGTGCACTGGAACGGGGCGGCGCAGTGTGAAGTGAACCTGCCGACGCCGCTGCCGGCGGACATGATGAGCAGCCT GCTGCTGCCTTGCACCCCGCTTACGGGGGCTGATACCTCAACAGGACACGAGGCGACGCGGTAA Protein sequence : MAFSLTGKLFRLQALGLCISLAVGSTALYAAEEIQFNMDVLDVNDRKNIDLSQFSRGGYIMPGAYSMAVHINKNELPEEN INFYAPEDDPKGSMACLSPELVGQLGLKADATKTLTWWHQDACLNIDSLKGMEVRADLATSALYLSIPQVYLEYSSPDWD PPSRWDEGIPGLLFDYNLNGQTQHQQRDGSQSYNLSGNGTAGANMGAWRLRADWQGNLDHQTGSGQGTNQKLDWSRYYLY RAIPALRSKLTLGEDYLNSGMFDSFRFTGASLVSDDNMLPPNLRGYAPEVVGMAKTNAKVIISQQGRVLYETQVAAGPFR IQDINDAVSGELDVRVEEQDGSVQEFTMNTSNIPYLTRPGAVRFKLATGKPSDWQHHSRGPLFGTGEFSWGVSNGWSLYG GALMGGDYNALSLGIGRDLMAFGALSFDATQSRARIPAEDSTLSGGSYRVSYSKTFDEIDSQVTFAGYRFSEEDFMSMSE YLDARYYGSRVGGSKEMYTITFNKQFRELGLSTYLNYSHQTYWSRSDNDRYNLTMSRYFDIGRFKNLSVSLSAYRNKYNE TNDDGMYLSLSMPWGNGGNVSYNTTVNRNDTTHRVGYYDRIDENNNYQLAMGTSRSGVNASGYYNHSGDMARVSANASYQ EGRYSAVGFSAQGGATLTAEGGALHRGGVAGGTRMLLDTEGVAGVPVRGYGATSKTNAWGKAVVADVNSYYRNKASIDLN KLGDNAEATKSVVQATLTEGAIGYRKFGVIAGEKAMAIIKLADGSTPPFGATVTNSRKQETGIVNDGGSVYLSGINAGDR MTVHWNGAAQCEVNLPTPLPADMMSSLLLPCTPLTGADTSTGHEATR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 50 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 3e-173 | 48 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 4e-173 | 48 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 4e-173 | 48 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 4e-173 | 48 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 1e-171 | 47 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 7e-172 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SerAS9_4817 | YP_004508171.1 | fimbrial biogenesis outer membrane usher protein | VFG1548 | Protein | 2e-173 | 48 |
| SerAS9_4817 | YP_004508171.1 | fimbrial biogenesis outer membrane usher protein | VFG0884 | Protein | 2e-173 | 48 |
| SerAS9_4817 | YP_004508171.1 | fimbrial biogenesis outer membrane usher protein | VFG0895 | Protein | 2e-173 | 48 |
