Gene Information

Name : SerAS9_4500 (SerAS9_4500)
Accession : YP_004507855.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 4852246 - 4853157 bp
Length : 912 bp
Strand : +
Note : PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_4393 DNA-binding transcriptional regulator

DNA sequence :
ATGGAAAGACTAAAACGGATGTCGGTGTTCGCAAAAGTCGTTGAATGCGGGTCGTTTACGGCGGCTGCGCGCCAGCTTGA
TATGAGCGTTTCGTCTATCAGCCAGACCGTCTCCAAACTGGAGAATGAGCTGCAGGTCAAGCTGCTCAACCGCAGCACGC
GCCGCATTGGCCTGACGGAAGCCGGGAAAATTTACTATCAGGGCTGCCGCCGCATGCTGCAGGAAGTGAGCGAGGTGCAC
GAGCAGCTGTACGCGTTTAACAATACGCCGACCGGCACGCTGCGTATCGGCAGTTCGTCCACCATGGCGCAAAACGTGCT
GGCGACCATGACCGCCGATATGCTGAAGGAATATCCCGGCCTGACGGTGAACCTGGTGACCGGTATTCCGGCGCCGGATC
TGATTGCCGATGGGCTGGATGTGGTGATCCGCACCGGCGCGCTGCAAGATTCCAGCCTGTTCTCCAAACGCCTCGGTTCA
ATGCCGATGGTGATATGCGCCGCGAAAAATTACCTCAGCCAGCACGGCACGCCGCAGAAGCCCAGCGACATGGTCAACTT
TTCCTGGCTGGAATACAGCGTGCGGCCGGACAGCGAATTCGAACTGATAGCCCCCGAAGGCATCACCACACGCATCTCGC
CGCAAGGGCGCTTTGTCACCAACGATTCGCAAACCATGATCCGCTGGCTGAAAGCCGGGGCAGGCATCGCCTATGCACCG
CTGATGTGGGTGATCGAAGAGATCAAACGCGGTGAGATCGAGATCCTGTTCAAAAGCTATCACTCGGATCCTCGCCCGGT
ATACGCCCTGTACACCGAGAAAGACAAGCTGCCGCTTAAGGTGCAGGTGTGCATCGACTACCTGACGGAGTACTTCAAGC
GCGTGGCGGAAGTCTATCAGGGCTACCGCTGA

Protein sequence :
MERLKRMSVFAKVVECGSFTAAARQLDMSVSSISQTVSKLENELQVKLLNRSTRRIGLTEAGKIYYQGCRRMLQEVSEVH
EQLYAFNNTPTGTLRIGSSSTMAQNVLATMTADMLKEYPGLTVNLVTGIPAPDLIADGLDVVIRTGALQDSSLFSKRLGS
MPMVICAAKNYLSQHGTPQKPSDMVNFSWLEYSVRPDSEFELIAPEGITTRISPQGRFVTNDSQTMIRWLKAGAGIAYAP
LMWVIEEIKRGEIEILFKSYHSDPRPVYALYTEKDKLPLKVQVCIDYLTEYFKRVAEVYQGYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 2e-137 93