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Name : SerAS9_4095 (SerAS9_4095) Accession : YP_004507455.1 Strain : Serratia plymuthica AS9 Genome accession: NC_015567 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 4378759 - 4379973 bp Length : 1215 bp Strand : - Note : PFAM: Integrase, catalytic core, phage; KEGG: spe:Spro_3887 integrase DNA sequence : ATGCCCCTCACAGACCTTGAGCTACGGCGCTCTAAGCCGCAAGACAAGCCCTATACACTCAGTGATGGCGGTGGGCTTTC TATACTCATTGAGCCGAACGGTTCCAAAGGCTGGCGCTTTCGCTACCGCTTCGACGGTAAACCCAAAATGCTTTCCCTCG GCACATATCCCACAGTTTCACTAACCGACGCAAGGCAAAAGCGCGATGAGGCTAAAAAGCTGGTGGCATCGGGCATTAAC CCCAGCGAAGCCAGGAAGCAGCAGAAACGAGATCGGCAAGATGTGACTGGCAATACCTTCGAGGGGATAGCGCGGGAATG GTACGTCAAGCGGCGAGATCGCTGGTCAGAGTCCTACGCAGAAGAGATGATGAAAACGTTTGAGAGCGATGTTTTCCCAT ACATCGGCCATCGGCCAATTGCCGAAATAAAGCCAATGGAGCTTATGGGGACGCTTTCTAAACTCGACGAACGTGGCGCA ACAGAGAAGTTACGCAAGGTGCGCCAGCGGTGTGGGGAGGTATGGAAATATGCCATCGTCACCGGTAGGGCTGAATATAA CCCAGCTCCAGATCTCGCCAGCGCGTTCTCACCGCATAAAAAAGAACACTATGCCTTCTTGTCAGTTGCCGAGCTGCCCG ACTTTTTCCGCACCTTTAACACATACACCGGCAGCCTGATCGTTAAGCTGGCTATGCGCTTGCTTATTATCACAGGGACA AGGCCGGGAGAACTGCGTAAGGCTGAATGGTCGGAGTTTGATTTTGATAACCGACTCTGGGAAGTACCGCCCGAACGCAT GAAGAAACGCCGCCCTCATTGTGTACCTTTATCCGACCAGGCCATCAGTATCCTGGAACAGCTTAAACCGCTGACCGGTC ATTACAGCTACGTGTTTCCGGGCAGGATCCACCACAGCAAGCCAATAAGCGAAATGGCTATGAATGTTCTGGTTCGCCGT ATTGGTTACGCTGGGCGTGTAACAGGCCACGGCTTCCGCCACACCATGAGCACCATTCTGCACGAGCAGGGCTATAACAC CGCTTGGATTGAAACTCAGTTGGCCCATGTCGATAAAAATTCTATCCGTGGCACATACAACCATGCCCAATACTTGGATG GTCGCCGGGAAATGCTTCAGTGGTATGCCGATTATATAGATGCGCTGGAGCGTGGCGATAATGTTGTGCATGGCACATTT GGGAAAAGTGCATGA Protein sequence : MPLTDLELRRSKPQDKPYTLSDGGGLSILIEPNGSKGWRFRYRFDGKPKMLSLGTYPTVSLTDARQKRDEAKKLVASGIN PSEARKQQKRDRQDVTGNTFEGIAREWYVKRRDRWSESYAEEMMKTFESDVFPYIGHRPIAEIKPMELMGTLSKLDERGA TEKLRKVRQRCGEVWKYAIVTGRAEYNPAPDLASAFSPHKKEHYAFLSVAELPDFFRTFNTYTGSLIVKLAMRLLIITGT RPGELRKAEWSEFDFDNRLWEVPPERMKKRRPHCVPLSDQAISILEQLKPLTGHYSYVFPGRIHHSKPISEMAMNVLVRR IGYAGRVTGHGFRHTMSTILHEQGYNTAWIETQLAHVDKNSIRGTYNHAQYLDGRREMLQWYADYIDALERGDNVVHGTF GKSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 5e-123 | 61 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 1e-124 | 61 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 8e-125 | 61 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 4e-118 | 61 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 9e-124 | 61 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 9e-124 | 61 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 1e-123 | 61 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 1e-123 | 61 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 2e-122 | 60 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 2e-122 | 60 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 2e-122 | 60 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 3e-111 | 53 |
| intA | AAB00935.1 | integrase A | Not tested | vap locus | Protein | 1e-61 | 41 |
| int | AAL51003.1 | CP4-like integrase | Not tested | LEE | Protein | 6e-71 | 41 |
| int | AAT48697.1 | CP4-like integrase | Not tested | PAI I 4787 | Protein | 6e-71 | 41 |
| SESS1296_03598 | AFO66301.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 7e-73 | 41 |
| SESS1635_03816 | AFO66367.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 7e-73 | 41 |
| int | AAN62223.1 | putative integrase | Not tested | PAGI-3(SG) | Protein | 3e-65 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SerAS9_4095 | YP_004507455.1 | integrase | VFG0783 | Protein | 5e-124 | 61 |
| SerAS9_4095 | YP_004507455.1 | integrase | VFG0598 | Protein | 1e-122 | 60 |
