Gene Information

Name : SerAS9_4042 (SerAS9_4042)
Accession : YP_004507403.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Virulence
Product : Pili assembly chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 4327269 - 4327946 bp
Length : 678 bp
Strand : -
Note : PFAM: Pili assembly chaperone, N-terminal, bacterial; Pili assembly chaperone, C-terminal, bacterial; KEGG: spe:Spro_2873 pili assembly chaperone

DNA sequence : 
ATGAAAGCAGGATATTTCACGTTGGTTGCAGCGTTGCTGATGATGTTTTGGGTGCCGGCCCAGGCTGGGGTGGTGGTGGG
CGGGACCCGTCTGATTTATGACGGCGCCAAAAAAGAGTCTGCATTGAATATCAGCAATCCGGACGCCGAGCCTTACCTGA
TCCAATCGTGGGTTGATGCGCAAGAGGGTGACAGTGCCAAAGCACCTTTTATCATTACTCCTCCACTTTTCCGGCTGGAC
GGCGGGCAAAATAACCTTTTACGGGTAGTGCGGGCGGGCGGCAATCTGCCGTCAGACAGAGAGTCGCTGTATTGGCTGAA
CGTAAAAGCCATTCCGTCGGTAGAAAAGAAAGACAACACGTTGCAAATTGCGATCAAGACTCGCATCAAGCTGATTTATC
GCCCGCAAGGCTTGTCCGGCAATCTGGAAGAGGCGGTCGGCAAGCTGACATGGCAGCGCAGTGGCAACGCTTTACGGGTG
ACCAACCCGTCTCCTTATTACCTCACCTTTTTCAATTTGAAGCTCAACGGCAGTGCCGTTGCCGGTAGCACTATGGTTGC
GCCGCAGACCACCGCCAGTTTCCCGCTGTCTGCGGGGGGGAGCGCAGGTGGAAATCTCAGTTGGCAAATAATCAATGACT
ACGGAGGTACAGGAAAGACGTTCGCCAGTACGTTATAA

Protein sequence : 
MKAGYFTLVAALLMMFWVPAQAGVVVGGTRLIYDGAKKESALNISNPDAEPYLIQSWVDAQEGDSAKAPFIITPPLFRLD
GGQNNLLRVVRAGGNLPSDRESLYWLNVKAIPSVEKKDNTLQIAIKTRIKLIYRPQGLSGNLEEAVGKLTWQRSGNALRV
TNPSPYYLTFFNLKLNGSAVAGSTMVAPQTTASFPLSAGGSAGGNLSWQIINDYGGTGKTFASTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 4e-38 46
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 2e-37 46
phfC AAO17171.1 PhfC Virulence tcd island Protein 1e-42 43
lpfB YP_006098366.1 fimbrial chaperone protein Not tested Tn2411 Protein 5e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS9_4042 YP_004507403.1 Pili assembly chaperone VFG0911 Protein 1e-37 46
SerAS9_4042 YP_004507403.1 Pili assembly chaperone VFG1644 Protein 1e-37 46
SerAS9_4042 YP_004507403.1 Pili assembly chaperone VFG0875 Protein 2e-37 45
SerAS9_4042 YP_004507403.1 Pili assembly chaperone VFG0455 Protein 4e-38 44
SerAS9_4042 YP_004507403.1 Pili assembly chaperone VFG0445 Protein 2e-39 43