Gene Information

Name : SerAS9_3618 (SerAS9_3618)
Accession : YP_004506988.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 3858630 - 3859655 bp
Length : 1026 bp
Strand : +
Note : PFAM: Bacterial transport system permease; KEGG: spe:Spro_3425 iron-enterobactin transporter permease

DNA sequence :
ATGTCGATGTTGGCTGCCCGTCTGATGACCGATCAAAAATTGCGTGCCCTGTCGCGGCCGGCGCTGACCGCGTCGATACT
GGCGCTTGCCTGCGGGGTACTGGCGATTTACGCTCTAGGTTCCGGTTCCCTTTCGCTTGACGCCACGCAGGTGATCGACG
CTCTCCTCGGCAAAGGCCCGGCAAACCTGACGGTAATAGTCACCCAGTGGCGCCTGCCACGCGTCACTATGGCGTTGCTG
TTGGGTGCCGCACTCGGGATCAGCGGCGCCATTTTCCAGTCTCTGCTGCGCAACCCGCTCGGCAGCCCGGACGTGATTGG
CTTCAATACCGGCGCCTACAGCGGCGTATTGGTAGCCATAGTATTGTTTAACGGCGGCGTTATCGGCATCACCTCCGGGG
CACTGGCCGGCGGCCTGCTGACCGCCGCGCTGGTTTATCTGCTGGCATGGCGCAACGGTGTCGAGACTTTCCGTTTGATT
ATCGTCGGCATCGCCGTGCGCGCCCTGCTGGTCGCCGGTAATACCTGGCTTATCATCAGCGCCTCACTGGAATCCGCCAT
GACCGCCGGGCTGTGGAGCGCAGGGTCTCTTAACGGCATAAGCTGGGCGAAAAGCCTGCCGGTGCTGGCAGTGATCGCGC
TGTGTTGCCTGCTGTTGCTGACGTTGTCACGCCGCATGCGGCTGCTGGAAATGGGTGACGATACCGCCTGCGCCCTTGGC
GTGCCGGTGGAACGTTCGCGCGTACTGCTGCTGCTGATCGGCGTAACGCTGACCGCTGCCGCCACCGCCGTGGCCGGGCC
GATCTCCTTTATTGCGCTGGTGGCGCCGCAGATTGCCCGCCGCCTGTGCGCCAACCGCAGCGTCCTGTTGCTGACCGCCC
TGACCGGCGCGTTGTTGCTGCTGATCGCCGATGTCGCCGCCCAGCGCCTGTTTATGCCTTATCAACTGCCGGTAGGCGTG
CTGACCGTCAGCCTCGGCGGCATTTATCTGATTTGGCTGTTAATCCGTGAGTCACGAAAAAAATGA

Protein sequence :
MSMLAARLMTDQKLRALSRPALTASILALACGVLAIYALGSGSLSLDATQVIDALLGKGPANLTVIVTQWRLPRVTMALL
LGAALGISGAIFQSLLRNPLGSPDVIGFNTGAYSGVLVAIVLFNGGVIGITSGALAGGLLTAALVYLLAWRNGVETFRLI
IVGIAVRALLVAGNTWLIISASLESAMTAGLWSAGSLNGISWAKSLPVLAVIALCCLLLLTLSRRMRLLEMGDDTACALG
VPVERSRVLLLLIGVTLTAAATAVAGPISFIALVAPQIARRLCANRSVLLLTALTGALLLLIADVAAQRLFMPYQLPVGV
LTVSLGGIYLIWLLIRESRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-31 53
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 1e-31 53
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 1e-31 53
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 9e-32 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS9_3618 YP_004506988.1 ABC transporter permease VFG0928 Protein 3e-60 67