Gene Information

Name : SerAS9_3617 (SerAS9_3617)
Accession : YP_004506987.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 3857557 - 3858630 bp
Length : 1074 bp
Strand : +
Note : PFAM: Bacterial transport system permease; KEGG: spe:Spro_3424 iron-enterobactin transporter membrane protein

DNA sequence :
ATGTTACGGACTACACGCAATGGCACACCGTCCATTCCAGCCCCCAGGGATCGTCTTATTAGCGGCACTCCCCACTCATT
TCGTCGCAAACTATCGGGTTTGCTGCTTGCCGTTTGCGCGCTGTTGGCCGTGATGCTGCTCAGCCTGTCGCTCGGCGCTA
AATCCATCCCATTCGATACGGTTGTCCAGGCGCTGAACGGTCAATGCCGTGGAGCGGATTGCACCATCATTACCGAAGCC
AGATTGCCGCGCACGCTGGTGGGCGTATTGGCCGGCATTGCGCTGGGCCTGTCCGGCGTATTGATGCAAACCCTCACCCG
CAACCCACTGGCCGATCCGGGCATTCTCGGCGTGAACGCCGGAGCGGGATTTGCCGTGGTACTGGGCATCACCTTCTTTG
GGGCCGCCGAGGTTAGCCAATACCTGTGGTTCGCCTTTGCCGGGGCGATGTTCGCTGCACTGCTGGTCGCGTTGATCGGC
GCTCTTGGCGGCAGCAGCCTGAACCCGGTCCGCCTGACGTTGGCCGGTGTCGCGCTGGCGGCGGTGCTGGAGGGAATGAC
CTCAGGGATTTCTCTGCTGAATCCGCTGGTGTTCGATCAACTGCGGTTTTGGCAGGCCGGTTCGCTGGATATTCAAAATA
TGCAGGTGGTGCGTACCGTCACCCTGCCGATCCTGCTGGGCACGCTAATCACACTGTGGATGAGCAAATCGCTTAACAGC
CTGAGCATGGGCAGCGAATTGGCCACTGCGCTGGGCACCGGCATCGTCCGCACCCAATTGCTGGGCCTGCTGGCGATCAC
CCTGCTGTGCGGGGGCGCCACCGCCGCCGTCGGACCGATTGCTTTCATCGGCCTGATGATGCCGCACATTGCCCGCCGGC
TGGCGGGATCCGAGCTGCATTGGATGCTGCCGTGGACGCTGGTATTGACCCCCATCCTGCTGCTGAGCGCCGATCTGATT
GGCCGCTTCCTGGTGGCCGGCGAACTGCGCGTTTCCATCGTGACCGCCCTGATTGGCGCACCGCTGCTGATCATGCTGGT
GCGCCAACGCCATATGTTCAGGAGGCAGCGCTAA

Protein sequence :
MLRTTRNGTPSIPAPRDRLISGTPHSFRRKLSGLLLAVCALLAVMLLSLSLGAKSIPFDTVVQALNGQCRGADCTIITEA
RLPRTLVGVLAGIALGLSGVLMQTLTRNPLADPGILGVNAGAGFAVVLGITFFGAAEVSQYLWFAFAGAMFAALLVALIG
ALGGSSLNPVRLTLAGVALAAVLEGMTSGISLLNPLVFDQLRFWQAGSLDIQNMQVVRTVTLPILLGTLITLWMSKSLNS
LSMGSELATALGTGIVRTQLLGLLAITLLCGGATAAVGPIAFIGLMMPHIARRLAGSELHWMLPWTLVLTPILLLSADLI
GRFLVAGELRVSIVTALIGAPLLIMLVRQRHMFRRQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 7e-20 42
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 5e-20 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 4e-20 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 4e-20 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 4e-20 41
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 4e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS9_3617 YP_004506987.1 ABC transporter permease VFG0926 Protein 6e-48 65