Gene Information

Name : SerAS9_0292 (SerAS9_0292)
Accession : YP_004503715.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : S : Function unknown
COG ID : COG4717
EC number : -
Position : 338650 - 340146 bp
Length : 1497 bp
Strand : +
Note : TIGRFAM: integrating conjugative element protein, PFL_4705 family; KEGG: spe:Spro_4171 hypothetical protein

DNA sequence :
ATGGCTGATGTGAAATCTAACATGCTGCCGAAAGTGATTGTGGTCGGCGTGCTGGCTGCGGCCGTGGTTGTTGGGCTGAA
AGCCTGCAGCAGCAATAAAACGACGGAGAAAACTCAGCAGGCACATAACGTGCTGGCCAATATGTCGCCGGAGGAGTTGC
GCGCCCTAGGCGTTGAAGGGGACACGCCGGAAGACACGTTGCGCACCCTGGTCGGCACCCTGCGTACCACCCGGACCCAA
CAGGCTGAGCTGCAAAGCAACATCGACAAAGTATTGAAAGAAAACGAAGCGCTGCGCAAACGCAATACCAATGTCTCCGG
CCAGGTCAATGAGGCTGTGGCCGGTTTCCAGAAACAGGCGCAGCAACGCCAGCAGCAGCTCCAGCAGGAGCAGCAGACGC
TGATGGGGAAAATCCAGACGCTGACCGATCAATTGGCCGGGAACAAAGACAAGGCGAAGAGCGACAGTGATATCCCGCTC
GGTCTGGGGCTGGATGGCATGGGCGCCGGCGAGGGAAGCGCGGCACCTGGCCAGGATGGTTTGATGTGGGTCGGACCGAA
GGACATGAAAGAACCCGATCCGCGCAATCCGAACAGCGCCAAAGACGGCCCGCAGTTCCCGACGTCGTTCCTGTCTTATA
ACGCCATCACGCGCCAGAAAGCCGCCTATGAGCAGCAGGTAAAAGGCCGCACCAATGAAAAAGGGGGGGAGGAGAATGCC
GAGCCGGTGTTTACCTTGCCTGAGAACTCCACTCTGGTGGGCAGTCGTTCCATGACGGCGCTGCTGGGCCGGGTGCCGAT
CAACGGCACGGTGACCGACCCCTATCCGTTCAAACTGATGATTGGTAAAGATAACCTGACGGCGAACGGCATCGAGCTGC
CGGACGTGGAAGGGGCGATTGTCTCTGGGACCGCCAGTGGCGACTGGACGTTGTCGTGCGTGCGTGGCCAGGTCAACAGC
ATTACGTTCGTGTTTGCGGACGGTACGGTACGCACCTTGCCGCATCCTGACACCAATATGAAGGCAAACAGCAGCAACAA
TAGCGGCAACAGTGGCAAAGACGTCAGCACCACCGCCGGTATCGGCTGGATTTCCGATGACAATGGCATTCCCTGTATCG
GCGGGGAGCGTAAATCCAATGCCTTGACCTACCTGCCGACCATTGCCGCGTTGTCTGCCGCTAGCGCCGCCGGTGAGGGG
ATCAGCCAGGGGCAATACACCACGCAAAACAATGTCAATGGCATCAGCGACACCATGACCGGCAATGCCGGCCAAGCGGT
GCTGGGCAAAGCCCTGTCCGGCGGAATGAAAGAGACCGCCGATTGGGTACGCGAGCGCTACGGCATGATGTTCGACGCCG
TCTACGTCCCTCCGGGCCAGAAACTGGCCGTACACATTACCCGCCAACTGGCGATCGATTTTGAGACCAAAGGGCGCAAG
GTGCGTTACGACTTTAGCCTGCCAGGCGAAGACGGCAGCACCGGCGGACTGGATTAA

Protein sequence :
MADVKSNMLPKVIVVGVLAAAVVVGLKACSSNKTTEKTQQAHNVLANMSPEELRALGVEGDTPEDTLRTLVGTLRTTRTQ
QAELQSNIDKVLKENEALRKRNTNVSGQVNEAVAGFQKQAQQRQQQLQQEQQTLMGKIQTLTDQLAGNKDKAKSDSDIPL
GLGLDGMGAGEGSAAPGQDGLMWVGPKDMKEPDPRNPNSAKDGPQFPTSFLSYNAITRQKAAYEQQVKGRTNEKGGEENA
EPVFTLPENSTLVGSRSMTALLGRVPINGTVTDPYPFKLMIGKDNLTANGIELPDVEGAIVSGTASGDWTLSCVRGQVNS
ITFVFADGTVRTLPHPDTNMKANSSNNSGNSGKDVSTTAGIGWISDDNGIPCIGGERKSNALTYLPTIAALSAASAAGEG
ISQGQYTTQNNVNGISDTMTGNAGQAVLGKALSGGMKETADWVRERYGMMFDAVYVPPGQKLAVHITRQLAIDFETKGRK
VRYDFSLPGEDGSTGGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 4e-106 54
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 2e-93 51
t4268 NP_807865.1 hypothetical protein Not tested SPI-7 Protein 2e-101 51
STY4570 NP_458655.1 putative exported protein Not tested SPI-7 Protein 1e-100 51
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 2e-92 50
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 1e-93 50
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-65 43
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-63 43
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-63 42
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 6e-64 42