Gene Information

Name : SerAS9_2975 (SerAS9_2975)
Accession : YP_004506355.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Unknown
Product : capsular exopolysaccharide family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3206
EC number : 2.7.10.2
Position : 3162249 - 3164426 bp
Length : 2178 bp
Strand : -
Note : TIGRFAM: Exopolysaccharide synthesis protein; KEGG: spe:Spro_2893 non-specific protein-tyrosine kinase; PFAM: Lipopolysaccharide biosynthesis

DNA sequence :
ATGATGAAGAATAATGCAATGCCGATTGTGATGGCCGAGCAGGACGAGAAACTGGATTGGGAACGGCTGATTGGCCCGCT
GTGGGACAACCGCTGGCGCATTTTGCTGGTGACCGGCGTCGCCGGTGTCCTGGGCTGTGCCTATGCCTTGATGGCGACGC
CGATCTATCAGGCGACCGCGCTGGTGCAGGTGGAAAAACAGCTTTCGGGCGATTCGCTGCTGCGCGAAACGCTGGACAAC
TCGCTCGGGTCGGCTGGGCAGAATTCGGCGACGCAAGATGAAGTTTCGCTGGCGAAATCACGTTACGTGATTGGCAAAAC
CGTGGACGATCTCGGTTTGACGGTACGCATCAGCCCGGATTACTTTCCGCTGTTCGGCAAGGGACTGGCCCGCCTGAGCG
GCGAACCGCCACCGGTCTTGCTCATCTCAGGGATGACGGTACCGGCTGCGATGCAGGGCCAGGAACTGACCCTGACCGTG
CAGGATAAGCAACGTTATAGCCTGAGCCATGAAGGGAAGAACTTGTTCAGCGGCACCGTCGGACAACCGCTGAAGCAAGG
CGCCTGGGCGATGAACGTCACTGCGCTGGAGGCATTGCCGGGCACCGAGTTTAGCGTGGTCAACGTGCCGCGCCAGCAGG
CGGTGGATGATCTTCGCAACCTGCTTGACGTTGCTCCTGGCGGCAAGGAAAGCGGCATTATGACGTTCAACCTGGCCGGC
GAGGATCCGCAGCGCGCCGAAGCGGTGCTCAAGAGCATCACCGATAACTATCTGCAACAGAATGTGGATCGTAAAACCGA
GGAAGCGCAGCGCATGCTGGCCTTCCTGCACGAACAGCTGCCGCGCACTCAGACGTCGCTCAACAATGCCGAGAATCAGC
TCAACCAGTTTCGCCAGCAGAACGACTCGGTGGACCTGACGCTGGAAGCCAAATCGGTGCTGGATACTCAGGTTCAATTG
GAGGCCCAGTTGAATGAGCTGACCTTCAAAGAAGCGGAAATCTCAAAACTTTATACCCGCGAGCATCCGGCCTATCGTGC
ACTGCTGGAAAAGCGCGCCACGCTGGAGGCGGAAAAGGCGCGGCTCGGCAAACAGGTACAGACGCTGCCGAAAACGCAGC
AGGAAATTCTGCGTTTGACCCGCGATGTGCAGGTGGATCAGCAGGTATACATGCAACTGATGAACAAGCAGCAGGAATTG
AGCATCAGCAAAGCGGGCACCGTGGGCAATATCCGCATTATCGATGAGGCGGAAAGCGGTCTGCGGCCGCTAAAACCGCA
AAAAGCGATGATCGTGTTCTTCGCGCTGTTGATGGGGGGCGTGCTGTCGGCGTCGGTTGTGGTATTGCGCGCGGCGCTCC
AACGCGGCGTCAGTGACACCGAGGCGTTGGAAAAGCGCGGTATCAATGTGTATGCCACGGTTCCGCTGTCGCCGTGGCAG
CAAAAACGTAACCGCACTCAACAGCAGCTACTGCTCAAAAACAGCGGTGACAAGCTGCCGATCCTGGCCAAGGAAGAGCC
GGGGGATTTGTCCGTCGAAGCCATCCGCAGCCTGCGTACCAGTTTGCATTTCGCCATGATGGAGGCCAAAAACAACATCC
TGATGGTCTCCGGCGCCAGCCCCGCCAGCGGGAAAAGTTTTACCAGCACCAATCTGGCGGTGGTAATCGCCGAGGCAGGC
CAACGAGTACTGTTGATCGACGCAGACATGCGCAAAGGATTCCTGCACCGTTGGTTCAACAACAGCGCCAAGGGCGGTTT
GTCGGACATGCTGTCCGGGTTGATTGCGCCAGATCAGTCGGTGAAGAAAACCGCTATCGCCAATCTGGATTTTGTGCCGC
GGGGCCAGGTGCCGCCGAACCCGTCCGAACTGCTGATGCATCAGCGTTTTGCCGACTTCCTGCAGTGGGCGAGGCAGAAC
TATGATTTGGTGCTGATCGACACGCCGCCGGTGCTGGCGGTGACCGACGCCGCCATCGTGGGTCACCATGTCGGCACCGC
GCTGATGGTGGTGCGTTTTGAGATCGACACCGTCCGGCAGATCGAAACCAGCATTCGTCGTTTCGAGCAGAACGGCGTGG
CGATTAAAGGGGTGATCCTGAACGGCATGGTGAAAAAAACCGCCACCGATGCCGGCTACTACGCTTTTGCTTACCCCAGC
CATCAGGAAAAGGTGTAG

Protein sequence :
MMKNNAMPIVMAEQDEKLDWERLIGPLWDNRWRILLVTGVAGVLGCAYALMATPIYQATALVQVEKQLSGDSLLRETLDN
SLGSAGQNSATQDEVSLAKSRYVIGKTVDDLGLTVRISPDYFPLFGKGLARLSGEPPPVLLISGMTVPAAMQGQELTLTV
QDKQRYSLSHEGKNLFSGTVGQPLKQGAWAMNVTALEALPGTEFSVVNVPRQQAVDDLRNLLDVAPGGKESGIMTFNLAG
EDPQRAEAVLKSITDNYLQQNVDRKTEEAQRMLAFLHEQLPRTQTSLNNAENQLNQFRQQNDSVDLTLEAKSVLDTQVQL
EAQLNELTFKEAEISKLYTREHPAYRALLEKRATLEAEKARLGKQVQTLPKTQQEILRLTRDVQVDQQVYMQLMNKQQEL
SISKAGTVGNIRIIDEAESGLRPLKPQKAMIVFFALLMGGVLSASVVVLRAALQRGVSDTEALEKRGINVYATVPLSPWQ
QKRNRTQQQLLLKNSGDKLPILAKEEPGDLSVEAIRSLRTSLHFAMMEAKNNILMVSGASPASGKSFTSTNLAVVIAEAG
QRVLLIDADMRKGFLHRWFNNSAKGGLSDMLSGLIAPDQSVKKTAIANLDFVPRGQVPPNPSELLMHQRFADFLQWARQN
YDLVLIDTPPVLAVTDAAIVGHHVGTALMVVRFEIDTVRQIETSIRRFEQNGVAIKGVILNGMVKKTATDAGYYAFAYPS
HQEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf41 AAO18066.1 Orf41 Not tested TTSS locus Protein 1e-151 46