Gene Information

Name : SerAS9_2621 (SerAS9_2621)
Accession : YP_004506004.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1221
EC number : -
Position : 2819872 - 2820879 bp
Length : 1008 bp
Strand : +
Note : TIGRFAM: Transcription activator PspF; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; KEGG: spe:Spro_2625 phage shock protein operon transcriptional activator; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGAGCGAACAGTTAGAAAACCTGTTGGGCGAAGCGAACGCCTTTGTCGAAGTATTGGAGCAAGTCTCACAACTGGCAAA
GTTGAACAAGCCGGTGCTGGTGATCGGTGAACGCGGCACCGGTAAGGAGCTTATCGCCCACCGTCTGCACTACCTCTCCA
ACCGATGGCAAGGGCCCTTTATCTCGCTTAACTGCGCGGCTTTGAATGAAAACTTACTGGATTCCGAGCTGTTCGGCCAT
GAAGCGGGTGCTTTTACCGGCGCGCAGAAACGCCACCTGGGTCGCTTTGAGCGCGCCGACGGCGGCACGCTGTTTCTCGA
CGAACTGGCCACCGCCCCCATGCTGGTGCAGGAAAAACTGCTGCGGGTGATTGAATACGGCCACCTGGAGCGCGTAGGCG
GCAGCCAACCGCTGCAGGTTGATGTGCGGTTGGTGTGCGCCACCAACGATGACTTGCCTGCGCTGGCGGCAGCGGGGAAA
TTCCGCGCCGACCTGTTGGACCGGCTGGCGTTCGACGTCGTTCAACTGCCGCCGCTGCGCCAGCGGCAGCAAGACATCAT
GTTGCTGGCAGAACACTTTGCGATTCAGATGTGCCGCGAGCTGTCGCTGCAGTTGTTCCCCGGCTTCACCGAACGCGCCA
GGGATACGCTGATCGCCTATAGCTGGCCGGGCAACGTGCGGGAATTGAAAAACGTGGTGGAACGTTCCGTATACCGGCAC
GGCACCAGTGCCAACGCGCTCGATGAAATCGTTATCAATCCCTTTGCCCAACGGGAAAACCCCCTCCCACTGCCGGAGCG
CGAAACGCGCAATAACCGACCGACGCTACCGCTGGATTTAAAAACCTGGCAGTTGGAACAGGAAAAGTCGTTGATCGAAG
CGGCGCTGCAACAAGGGAAATTTAACCAACGCAAGGCCGCAGGCCTGCTGGGGCTGACCTATCATCAGTTGCGGGGGATG
CTGAAAAAACATGCACTCCTGCAAAATGGGGATGCGGAAGAAGATTAA

Protein sequence :
MSEQLENLLGEANAFVEVLEQVSQLAKLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPFISLNCAALNENLLDSELFGH
EAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPALAAAGK
FRADLLDRLAFDVVQLPPLRQRQQDIMLLAEHFAIQMCRELSLQLFPGFTERARDTLIAYSWPGNVRELKNVVERSVYRH
GTSANALDEIVINPFAQRENPLPLPERETRNNRPTLPLDLKTWQLEQEKSLIEAALQQGKFNQRKAAGLLGLTYHQLRGM
LKKHALLQNGDAEED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpRS ABA47311.1 HrpRS Virulence S-PAI Protein 8e-33 41
unnamed AAT96363.1 HrpS/HrpR-like protein Virulence S-PAI Protein 6e-33 41