Gene Information

Name : SerAS9_2108 (SerAS9_2108)
Accession : YP_004505495.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2263269 - 2264273 bp
Length : 1005 bp
Strand : -
Note : PFAM: Bacterial transport system permease; KEGG: spe:Spro_2166 transport system permease

DNA sequence : 
ATGCCTGGCCGCACCTCTGCGCGCGTGACCATTGCCGGCCTGTTGGTGCTGCTTGCGCTATTGGCGCTGGGCGCCGCCAA
TATGGGCGCGCTGACGCTGTCGTTTCGCACCCTGTGGCAAGAGCCGTTCAGCGATACCTCTTGGCATATCTGGCTAAACA
TCCGCTTGCCGCGTGTGCTGCTGGCGGTGGTCATCGGCTGCGCACTGGCGGTGTCCGGCGCCGTCATGCAGGGGCTGTTC
CGCAATCCGCTGGCCGATCCCAGCCTGTTGGGCATCAGTAGCGGCGGCGCGCTGTTTGTCGCGCTGATTATCGTTATGCC
GCTGGCCCTGCCGCCGGTGATTGCCTTGTATGGCCACATGTTGGCGGCTTTCCTCGGCAGCCTGCTGGTGTCACTGCTGA
TCTACGGCATCAGCCGCAGCGGGCACGGCAGCCTGTCACGCCTGTTGCTGGCGGGGATCGCCATCAACGCCCTGTGCATG
GCGGCCATCGGCGTGCTGTCTTATCTCAGCAGCGATCAACAGCTACGCCAGTTTTCATTGTGGATGATGGGCAGCCTGAG
CCAGTCACAGTGGCCAACGCTGATCGTATCGGCCTCTTTGATCCTGCCGGCGGCCCTGCTGACGCTGTTACAGGCGCGCT
GCCTGAACCTGCTGCAACTGGGCGATGAAGAGGCGCACTACCTCGGCGTGAATGTCCAGCGTGCCAAACTGCAATTGCTT
CTGCTTAGCGCATTGTTGATTGGCGCAGCGGTGGCGATGAGCGGCGTCATTGGCTTTATCGGCCTGGTGGTGCCGCACCT
GGTGCGCATGCGACTCGGCGGCGACCACCGCTGGCTGCTGCCCTGCTCCGCGCTGGGCGGCGCCTGCCTGCTGCTGGTCA
GCGACACACTGGCACGGACGCTGGTGGCGCCGGCGGAGATGCCGGTCGGGCTGATGACCAGCCTGATTGGCGGGCCTTAT
TTCTTATGGCTGGTCATGCGCCAGCGGGAGCGTACGGATGGGTAA

Protein sequence : 
MPGRTSARVTIAGLLVLLALLALGAANMGALTLSFRTLWQEPFSDTSWHIWLNIRLPRVLLAVVIGCALAVSGAVMQGLF
RNPLADPSLLGISSGGALFVALIIVMPLALPPVIALYGHMLAAFLGSLLVSLLIYGISRSGHGSLSRLLLAGIAINALCM
AAIGVLSYLSSDQQLRQFSLWMMGSLSQSQWPTLIVSASLILPAALLTLLQARCLNLLQLGDEEAHYLGVNVQRAKLQLL
LLSALLIGAAVAMSGVIGFIGLVVPHLVRMRLGGDHRWLLPCSALGGACLLLVSDTLARTLVAPAEMPVGLMTSLIGGPY
FLWLVMRQRERTDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 2e-19 42
fecC AAL08453.1 FecC Virulence SRL Protein 8e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS9_2108 YP_004505495.1 ABC transporter permease BAC0163 Protein 1e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS9_2108 YP_004505495.1 ABC transporter permease VFG0922 Protein 3e-70 65
SerAS9_2108 YP_004505495.1 ABC transporter permease VFG1043 Protein 1e-19 42
SerAS9_2108 YP_004505495.1 ABC transporter permease VFG1044 Protein 4e-23 42