|
Name : SerAS9_1220 (SerAS9_1220) Accession : YP_004504621.1 Strain : Serratia plymuthica AS9 Genome accession: NC_015567 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.4 Position : 1336572 - 1338641 bp Length : 2070 bp Strand : - Note : PFAM: ATPase, P-type, ATPase-associated region; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: spe:Spro_1247 DNA sequence : ATGACTCGCAAACAACGCGCACTGTTTGAACCGGCATTGGTCCGTACCGCGCTGATCGATGCGGTGAAAAAATTGGATCC GCGCACCCAATGGCGTAACCCGGTGATGTTCGTGGTGTATATCGGCAGCATTTTGACTACCGTCATCTGGCTGGCGATCC TGGCCAAACAAACCGATGGCAGCGCCGCCTTTACCGGCAGTATCGCCCTGTGGCTGTGGTTCACCGTGCTGTTCGCCAAC GTTGCCGAAGCGCTGGCCGAGGGGCGCAGCAAGGCGCAGGCAGAAAGCCTGAGGGGCACCAAGAAAACCAGTTGGGCGAA GAAATTGGCCGCGCCGCGCCGTGACGGTGCCACCGAGAAAGTGTCAGCCGAGAGCCTGCGCAAGGGCGACGTGGTGCTGG TGGAAGCCGGCGATACCATCCCTTGCGACGGTGAGGTGCTGGAAGGCGGCGCGTCAGTAGATGAAAGCGCCATTACCGGT GAGTCTGCGCCGGTGATACGCGAATCCGGCGGCGACTTCTCGTCAGTGACCGGCGGCACCCGCGTACTGTCCGACTGGCT GGTGGTACAGTGCAGCGTCAACCCCGGCGAAACCTTCCTCGATCGGATGATCGCTATGGTGGAAGGCGCCAAGCGGCGTA AAACTCCGAACGAGGTGGCGCTGACCATTCTGCTGGTGGCGCTGACCATCGTGTTCGTGCTGGCGACCGCTACGCTGTTC CCGTTCTCGCAATACAGCGTGGATGCCGCCAAGGGCGGGTCAGTCGTCAGCATCACCGTGCTGGTGGCGCTGCTGGTCTG CCTGATCCCAACGACTATCGGTGGCCTGCTGTCTGCCATCGGCGTGGCGGGGATGAGCCGGATGCTGGGTGCCAACGTGA TCGCCACCAGCGGCCGTGCGGTAGAAGCGGCTGGCGACGTTGACGTGCTGCTGCTGGACAAAACCGGCACCATCACGCTG GGTAACCGTCAGGCCTCCGAGTTTCTGCCTGCACCTGGCGTGAAGGAACAGGATCTGGCCGATGCGGCGCAGTTGTCCTC ACTGGCCGATGAAACGCCGGAAGGCCGCAGCATTGTGGTGCTGGCCAAGCAGCGCTTTAACCTGCGCGAACGCGACCTGC AGGCACTGAACGCCACTTTCGTGCCCTTCTCCGCCCAGACGCGCATGAGCGGCGTCAACGTGCAGGACCGCATGATCCGC AAAGGAGCAGTGGATGCCATTCGCCGCCATGTGGAATCCAATCAGGGCCACTTCCCGCAGGCGGTGGACGATCTGGTGGC TAGCGTAGCGCGCACCGGCGGTACGCCGCTGGTGGTGGCCGAAGGGCCGCGGGTGTTGGGCGTGGTAGCGCTGAAAGATA TCGTCAAGGGCGGCATTAAAGAGCGTTTCGCCGAGCTGCGTAAAATGGGCATCAAAACGGTGATGATCACCGGCGATAAC CCCTTGACCGCAGCGGCGATCGCCGCCGAAGCCGGCGTGGATGACTTCCTGTCGGAAGCCACGCCGGAAGCCAAACTGGC GCTGATCCGTCAGTACCAGGCGGAAGGTCGGCTGGTGGCGATGACCGGCGACGGCACCAACGATGCCCCGGCACTGGCGC AGGCCGACGTGGCGGTAGCGATGAACTCGGGCACCCAGGCCGCCAAAGAGGCGGGCAACATGGTCGATCTGGACTCCAAC CCGACCAAGCTGATTGAAGTGGTGCATATCGGTAAACAGATGCTGATGACGCGCGGTTCTCTGACCACCTTCAGTATCGC CAACGACGTGGCGAAGTATTTCGCCATTATCCCGGCGGCGTTCGCGGCAACCTATCCGCAGTTGAACGCGCTGAATGTAA TGCACCTGCACTCCCCCGCTTCCGCCATTATGTCGGCGGTCATTTTCAACGCCCTGGTGATCGTGTTCCTGATCCCGCTG GCGCTGAAAGGGGTGAGCTATAAGCCCATGAGCGCCGCAGCGCTGCTGCGCCGCAACCTGTGGATGTACGGTGTGGGTGG CCTACTGGTGCCCTTTGTCGGCATCAAGCTGATCGATCTGGTCCTGGTCGCCTTGCATATCGCCGGTTAA Protein sequence : MTRKQRALFEPALVRTALIDAVKKLDPRTQWRNPVMFVVYIGSILTTVIWLAILAKQTDGSAAFTGSIALWLWFTVLFAN VAEALAEGRSKAQAESLRGTKKTSWAKKLAAPRRDGATEKVSAESLRKGDVVLVEAGDTIPCDGEVLEGGASVDESAITG ESAPVIRESGGDFSSVTGGTRVLSDWLVVQCSVNPGETFLDRMIAMVEGAKRRKTPNEVALTILLVALTIVFVLATATLF PFSQYSVDAAKGGSVVSITVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITL GNRQASEFLPAPGVKEQDLADAAQLSSLADETPEGRSIVVLAKQRFNLRERDLQALNATFVPFSAQTRMSGVNVQDRMIR KGAVDAIRRHVESNQGHFPQAVDDLVASVARTGGTPLVVAEGPRVLGVVALKDIVKGGIKERFAELRKMGIKTVMITGDN PLTAAAIAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSN PTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNVMHLHSPASAIMSAVIFNALVIVFLIPL ALKGVSYKPMSAAALLRRNLWMYGVGGLLVPFVGIKLIDLVLVALHIAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 0.0 | 63 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 0.0 | 63 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-156 | 57 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-154 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-154 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-154 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-154 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-154 | 56 |
