Gene Information

Name : SerAS9_1217 (SerAS9_1217)
Accession : YP_004504618.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Unknown
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1332357 - 1333046 bp
Length : 690 bp
Strand : -
Note : KEGG: spe:Spro_1244 DNA-binding transcriptional activator KdpE; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region

DNA sequence :
GTGAGCAGCACGCCAACCAACATTCTGATTGTCGAAGATGAAAAAGAGATCCGGCGTTTCGTGCGCATCGCATTGGAAAG
CGAAGGTCTGCGGGTGTTTGAAAGCGAGACGCTACAGCGCGGACTGATTGAAGCCGGCACGCGTAAACCGGATCTGATTA
TTCTCGATTTAGGGTTGCCGGACGGCGACGGGTTGAGCTATATCCGCGATCTGCGGCAGTGGAGCGCCATTCCGGTGATC
GTCCTCTCGGCGCGCAATGCCGAAGAGGACAAAATCGCCGCACTGGACGCCGGAGCGGACGATTATCTCAGCAAGCCCTT
TGGCATCGGCGAATTGCTGGCACGGGTGCGGGTTGCCTTGCGCCGCCACTCCGGCAGCCAACAAGAAAGCCCGCTGGTCA
GTTTTTCCGAAATCACCGTTGATCTGATCAACCGCCGGGTGCTGCGCAATGGCGAAGATCTGCACCTGACGCCAATAGAG
TTTCGACTACTGGCCGAATTGCTGGCCAACTCCGGCAAAGTGATCACCCAACGTCAGTTACTGAGCCACGTCTGGGGGCC
GAACTACGTCGAACACAGCCACTATCTGCGCATTTATATGGGGCACCTGCGGCAAAAGCTAGAGGCAGACCCGGCGCGGC
CGAAACACCTGCTGACCGAGACCGGCGTCGGGTACCGGTTTATGCCTTAA

Protein sequence :
MSSTPTNILIVEDEKEIRRFVRIALESEGLRVFESETLQRGLIEAGTRKPDLIILDLGLPDGDGLSYIRDLRQWSAIPVI
VLSARNAEEDKIAALDAGADDYLSKPFGIGELLARVRVALRRHSGSQQESPLVSFSEITVDLINRRVLRNGEDLHLTPIE
FRLLAELLANSGKVITQRQLLSHVWGPNYVEHSHYLRIYMGHLRQKLEADPARPKHLLTETGVGYRFMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 2e-18 41
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 3e-18 41
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 3e-18 41
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 3e-18 41
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 3e-18 41
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 1e-18 41