Gene Information

Name : SerAS12_0847 (SerAS12_0847)
Accession : YP_004499308.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : IucA/IucC family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : -
Position : 947237 - 948982 bp
Length : 1746 bp
Strand : -
Note : PFAM: IucA/IucC; KEGG: spe:Spro_0922 IucA/IucC family protein

DNA sequence : 
ATGACTCTCCAGTTTGAAACCGCGGCGACCGACGTGGCTGCCCAATGTTTTCTCAACGCACTGATGCGTGAAACCCGGGA
CTGGCAAATCGTTCCAGCCACCAACCACCCACAGTATCCGCAGCTCAACATTCCGCTTTCATCTACCCAGGCTATTCGCA
TTGCCTTACGCCATACCTCGCCCACACAGCACCATCAGTATCTTTTCCCTGCTTATCTGCATCAGCAGGACGATGGGGCT
GGCGTGGCGCTGAGCATGGCGCAACTGGTCACCCTGCTGCTGGAGAAACCGGCGATAAAAGGTGAGCTGTCCGATGAGGC
CGTAGCGCGTTTCCGGCAGCGTGTGCTGGAAAGTCATGATAATACCCGCCAGGCCATTGATGTCCGGCTGGACTGGCCTT
CACTGCGCGACAAGCCGCTGAACTTTGCCCAGGCGGAGCAAGGTCTGCTGGTCGGCCACGCCTTCCACCCGGCGCCGAAA
TCCCATGAGCCCTTCGATGAGCAGCAGGCGCGCCGCTACCTGCCGGACTTTGCCGCCAGCTTCCCGCTGCGCTGGTTTGC
CGTCGATAAGCGCTACCTGTGCGGGGACAGCCTGAACCTGACGCTGCAACAACGCCTGCAACGTTTTGCCGCCGAAAGCG
CGCCGCAGCTGTTGGCACACTTTACCGATGACGTGTGGCTGCTGCCGATGCATCCGTGGCAGGCCGACCATCTGCTGACA
CAGACATGGTGCCAGGATCTCGCCGTGCAGGGATTGCTGAGCGATCTGGGCGAAGCCGGCGAGCGCTGGCTGCCAACCAG
CTCCTCACGCTCGCTTTACAGCGCGGGCAACCGCGACATGATCAAATTCTCCCTCAGCGTGCGCCTGACCAACTCGGTGC
GCACCCTGTCGGTTAAAGAAGTAAAACGCGGTATCCGCCTGGCCCGGCTGGCGCAAACGCCGCGCTGGCAAGAGCTGCAA
GCGCGCTATCCGACCTTCCGCGTGATGCAGGAAGACGGCTGGGCCGGCCTGCGATCGGCGGACGGCACCGTCCAGGAAGA
AAGCCTGATGGCGCTGCGCGATAACCTGTTGTTCGACCAGCCGCATAGCCAAACCAACGTGCTGGTAACGCTGACGCAGG
CAGCACCGGATGGCGGTGACAGCCTGCTGGCCGCGGCAGTGCGCCGTCTGGCCGCCCGCCTGAATCTGCCGCTGCAACAA
GCCGCCCATGCCTGGCTGGACGCCTACTGCCAACAGGTATTGCTGCCGCTGTTCAGCACGGAAGCCGATTACGGGCTGGT
GCTGCTGGCCCACCAGCAAAACATTCTGGTGGAGATGCAGCAGGATCTGCCGATCGGCATGCTGTACCGCGACTGCCAGG
GCAGTGGCTTTACCCGCGATGCCGCGCCGTGGCTGGAAGAGATTGGCGAAGCCGATGCGGAAAACCGCTTCAGCGAACAG
CAATTGCTGCGCTACTTCCCTTACTACCTGCTGGTGAACTCCAGTCTGGCGGTGACCGCCGCGCTGGCTGCCGCCGGTTT
CGACACGGAAGAAAGTCTGATGGCCCGGGTGCGCGACGCGCTGAGCGGCCTGCGCGCCACGGCCAAAAACACCCTGTGCC
TGGACTACGTGCTCGACAGCAGCCACTGGAACTGCAAAGGCAACTTCTTCTGTTACCTGCACGACCACAACGAAAATACC
ATCGTCGATCCGGCGGTGATTTACTTTGATTTCGTCAATCCGCTGCGCCAGGGAGCCGCCCAATGA

Protein sequence : 
MTLQFETAATDVAAQCFLNALMRETRDWQIVPATNHPQYPQLNIPLSSTQAIRIALRHTSPTQHHQYLFPAYLHQQDDGA
GVALSMAQLVTLLLEKPAIKGELSDEAVARFRQRVLESHDNTRQAIDVRLDWPSLRDKPLNFAQAEQGLLVGHAFHPAPK
SHEPFDEQQARRYLPDFAASFPLRWFAVDKRYLCGDSLNLTLQQRLQRFAAESAPQLLAHFTDDVWLLPMHPWQADHLLT
QTWCQDLAVQGLLSDLGEAGERWLPTSSSRSLYSAGNRDMIKFSLSVRLTNSVRTLSVKEVKRGIRLARLAQTPRWQELQ
ARYPTFRVMQEDGWAGLRSADGTVQEESLMALRDNLLFDQPHSQTNVLVTLTQAAPDGGDSLLAAAVRRLAARLNLPLQQ
AAHAWLDAYCQQVLLPLFSTEADYGLVLLAHQQNILVEMQQDLPIGMLYRDCQGSGFTRDAAPWLEEIGEADAENRFSEQ
QLLRYFPYYLLVNSSLAVTAALAAAGFDTEESLMARVRDALSGLRATAKNTLCLDYVLDSSHWNCKGNFFCYLHDHNENT
IVDPAVIYFDFVNPLRQGAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucA NP_839223.1 siderophore biosynthesis protein Virulence SHI-2 Protein 2e-166 65
iucA NP_709454.2 siderophore biosynthesis protein Virulence SHI-2 Protein 2e-166 65
iucA AAD44746.1 IucA Virulence SHI-2 Protein 1e-166 65
iucA YP_002414046.1 aerobactin siderophore biosynthesis protein Virulence Not named Protein 7e-167 65
iucA AAK71631.1 IucA Virulence SHI-3 Protein 2e-149 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_0847 YP_004499308.1 IucA/IucC family protein VFG0615 Protein 8e-167 65
SerAS12_0847 YP_004499308.1 IucA/IucC family protein VFG0940 Protein 3e-167 65
SerAS12_0847 YP_004499308.1 IucA/IucC family protein VFG1081 Protein 9e-150 61