Gene Information

Name : SerAS12_0846 (SerAS12_0846)
Accession : YP_004499307.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : Siderophore biosynthesis protein
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1670
EC number : -
Position : 946290 - 947240 bp
Length : 951 bp
Strand : -
Note : PFAM: Siderophore biosynthesis protein, conserved region; KEGG: spe:Spro_0921 aerobactin siderophore biosynthesis protein IucB

DNA sequence : 
ATGATGCCGCACGCCAAACTGATGCATGCCGGCAGCGGCTTTCGCTGTGAACGGCTGGAAAAGGAGCTGCAACTCGGTCT
GGGCCTGGACGGCAGCGCGGTGCTGCACTATCCCGGTTCCCTGCCGCAAGGCTGGCTGGTGCAGGCGCTGGACCAGTTGC
TGATAGCCGCGCCGCAGTTGAGCGGTATCACGCTCCCCTATGCGCAATGGCGCGAAGAGCCGCAGGCTCAGGCGCTGTTC
GCGCTCGCAAGCGGCGACTATCTGGCTCGCGAGACGTTTTATCAGTTGCCGCTGTGGCTGGGCGCTGAACGCCACCGCGC
TTCCACCCAGATGCAGTATGACGCCGAACGCAGTCTCTGGTACCCGCAACGCCCGACGCGGCCCCATGGCGAGGTCTATC
GCCGTTACGATCCGCAGCTTAAGCAGACCCTGAGTTTCCGGCTGCCGGAAGTAGAACGCGATGCCGGGCAATTCACCCGT
TGGATGAATTCGCCACGCGTCGATGCCTTCTGGGAAATGAGCGGCCCGCTGGAAACGCAGGCGGCCTACCTGCAACGCCA
GCTGGATTCCAGCTACTGCTATCCGTTGCTGGGGTGTTTCGACGATCGCCCGTTCGGTTATTTCGAAGTCTATTGGGCAC
CGGAAGATCGCATTGGCCGCCACTACCGCTGGCAACCGTTCGACCGCGGGCTGCACATGCTGGTCGGCGAGGAAGATCGC
CGTGGCGCGCACTATATCCGCAGCTGGTTGCGCGGCCTGACTCATTATTTGTATCTGGATGAACCGCGCACCACGCGGGT
GGTCGCCGAGCCACGCGCCGATAACCAGCGTCTGTTCCGCCACCTGCCGGCCGCCGGTTACCACACCGTGAAAGAGTTCG
ATTTCCCGCACAAACGTTCGCGTCTGATCATGAATCAGCGCGATGAATTCTTCCGGGGGATCGGCTTATGA

Protein sequence : 
MMPHAKLMHAGSGFRCERLEKELQLGLGLDGSAVLHYPGSLPQGWLVQALDQLLIAAPQLSGITLPYAQWREEPQAQALF
ALASGDYLARETFYQLPLWLGAERHRASTQMQYDAERSLWYPQRPTRPHGEVYRRYDPQLKQTLSFRLPEVERDAGQFTR
WMNSPRVDAFWEMSGPLETQAAYLQRQLDSSYCYPLLGCFDDRPFGYFEVYWAPEDRIGRHYRWQPFDRGLHMLVGEEDR
RGAHYIRSWLRGLTHYLYLDEPRTTRVVAEPRADNQRLFRHLPAAGYHTVKEFDFPHKRSRLIMNQRDEFFRGIGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 1e-105 65
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 1e-106 65
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 1e-106 65
iucB AAD44747.1 IucB Virulence SHI-2 Protein 1e-106 65
iucB AAK71632.1 IucB Virulence SHI-3 Protein 1e-106 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_0846 YP_004499307.1 Siderophore biosynthesis protein VFG0939 Protein 4e-106 65
SerAS12_0846 YP_004499307.1 Siderophore biosynthesis protein VFG0616 Protein 5e-107 65
SerAS12_0846 YP_004499307.1 Siderophore biosynthesis protein VFG1082 Protein 5e-107 65