Gene Information

Name : SerAS12_4967 (SerAS12_4967)
Accession : YP_004503367.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 5373188 - 5374597 bp
Length : 1410 bp
Strand : +
Note : KEGG: spe:Spro_4881 glutamine synthetase; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp

DNA sequence :
ATGTCCGCTGAACACGTTTTGACGATGCTGAATGAGCATGAAGTGAAATTCGTAGACCTGCGTTTCACTGACACCAAGGG
TAAAGAGCAACACGTCACCATCCCTGCTCATCAGGTGAATGCCGACTTCTTCGAAGAAGGTAAAATGTTTGACGGCTCCT
CGATCGGCGGCTGGAAAGGCATCAACGAATCTGACATGGTGCTGATGCCAGACGCCAGCACTGCGGTGCTGGATCCGTTC
TTCGAAGAATCCACCCTGATTATTCGCTGCGACATTCTCGAGCCAGGCACCATGCAGGGCTACGACCGTGACCCGCGCTC
CATCTCCAAGCGTGCAGAAGACTTCCTGCGCTCTTCCGGCATCGCGGATACCGTGCTGTTCGGGCCAGAACCTGAGTTCT
TCCTGTTCGACGATATTCGTTTCGGCAGCAGCATCCGTGGTTCCCACGTGGCTATCGACGATATCGAAGGCGCATGGAAC
TCCGGCACCAAATACGATGGCGGCAACAAAGGCCACCGTCCGGCAGTAAAAGGCGGTTACTTCCCGGTTCCTCCGGTCGA
TTCTTCACAAGACATCCGTTCTACCATGTGCCTGACCATGGAAGAAATGGGTCTGGTGGTCGAAGCGCACCACCACGAAG
TGGCAACCGCAGGTCAGAACGAAGTGGCAACCCGCTTCAACACCATGACCAAGAAAGCCGACGAAATCCAAATCTACAAA
TACGTGGTTCACAACGTGGCTCACGCATTTGGCAAAACCGCGACCTTCATGCCGAAACCTATGTACGGTGATAACGGCTC
AGGTATGCACTGCCACATGTCACTGTCCAAGAACGGCACTAACCTGTTCGCTGGCGACAAATACGGCGGCCTGTCTGAAA
CTGCCCTGTTCTACATCGGCGGTATCATCAAGCACGCTAAAGCGATCAATGCCCTGGCCAACCCGACCACCAACTCTTAC
AAGCGTCTGGTCCCAGGCTACGAAGCGCCGGTCATGCTGGCTTACTCAGCCCGTAACCGTTCCGCTTCCATCCGTATCCC
AGTGGTTGCCAGCCCGAAAGCGCGCCGTATCGAAGCCCGTTTCCCGGATCCAGCGGCTAACCCATACCTGTGCTTCGCGG
CTCTGCTGATGGCAGGCCTGGATGGTGTGATTAACAAAATCCACCCTGGCGATGCCATGGACAAAAACCTGTATGACCTG
CCACCGGAAGAAGAAGCTGAAATTCCAAAAGTTGCAGGCTCTCTGGACGAAGCGCTGGCTGCACTGAGCGAAGACCGCGA
GTTCCTGACCCGTGGCGGCGTATTCACCGACGACGCAATCGACGCTTACATCGACCTGCGTAAAGAAGAAATGGACCGCG
TTCGCATGACGCCACACCCGGTTGAGTTCGAACTGTACTACAGCGTTTAA

Protein sequence :
MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAVLDPF
FEESTLIIRCDILEPGTMQGYDRDPRSISKRAEDFLRSSGIADTVLFGPEPEFFLFDDIRFGSSIRGSHVAIDDIEGAWN
SGTKYDGGNKGHRPAVKGGYFPVPPVDSSQDIRSTMCLTMEEMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK
YVVHNVAHAFGKTATFMPKPMYGDNGSGMHCHMSLSKNGTNLFAGDKYGGLSETALFYIGGIIKHAKAINALANPTTNSY
KRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEARFPDPAANPYLCFAALLMAGLDGVINKIHPGDAMDKNLYDL
PPEEEAEIPKVAGSLDEALAALSEDREFLTRGGVFTDDAIDAYIDLRKEEMDRVRMTPHPVEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-98 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_4967 YP_004503367.1 glutamine synthetase VFG1399 Protein 3e-114 50