Gene Information

Name : SerAS12_4958 (SerAS12_4958)
Accession : YP_004503358.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 5361070 - 5363151 bp
Length : 2082 bp
Strand : +
Note : TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; KEGG: spe:Spro_4871 ATP-dependent DNA helicase RecG; SMART: DEAD-like heli

DNA sequence :
ATGAAAGGCCGCCTGCTGGACGCCGTCGCTCTCACCACGCTTTCCGGGGTTGGAGCCAGCCAAGCGGGCAAGCTGGCCAA
AATTGGCCTGGAAACCATTCAGGACCTGCTGCTGCACCTCCCGCTGCGTTATGAAGACCGCACCCGCCTTTATCCGATCA
ACGACCTGCTGCCGGGCATTTTTGCCACTGTGGAAGGCGAAGTGCTGCGCAGCGATATCAGTTTTGGCCGTCGGCGTATG
CTGACCTGCCAGATCAGCGACGGCACCGGCCTGCTCACCATGCGTTTCTTTAACTTCAACGCAGCGATGAAAAACAGCCT
GGCCGCAGGCCGCCGCGTAACCGCTTACGGTGAGATCAAACGCGGCAACCACGGCGCAGAAATCATCCACCCGGAATACC
GCATTCAGGGGGAAAGCAGCGAGGTTGAACTGCAGGACTCACTGACGCCGGTTTATCCGACCACAGAAGGCATCAGGCAG
GCCACGCTGCGCAAGCTGACCGATCAGGCGCTGGAGCTGCTGGACACCTGCGCCATCGCCGAACTGCTGCCACCGGAACT
CAGTGGCGGGCTGATGAGCCTGCCGCAGGCGCTGCACACCCTGCACCGCCCGCCGCCGGATATTCAGTTGGAAGATTTGG
AGCAGGGCAAGCATCCGGCGCAAAAACGCCTGATCCTGGAAGAGCTGCTGGCGCATAACCTCAGCATGCTGGCAGTGCGC
GCCGGTGCGCAGAGTTATCAGGCGCTGCCGCTGATGCCGGATGACCGTCTGAAAAAACAATTTCTCGCCAAATTGCCGTT
CTCGCCGACCGGCGCGCAAGATCGCGTAGTGGCCGATATCGAAGCCGATATGCAAAAAGGCTTCCCGATGATGCGGCTGG
TGCAAGGTGATGTCGGCTCAGGTAAAACGCTGGTGGCCGCACTGGCGGCGCTACGCGCCATCGCCCACGGCAAACAGGTG
GCATTGATGGCGCCCACCGAACTGCTGGCCGAACAACACGCCAATAACTTCCGCCAGTGGTTTGAACCGCTGGGGCTTGA
AGTGGGCTGGCTGGCCGGTAAGCAAAAAGGCAAGGCACGCCTTGCTCAGCAGGAAGCGATCGCCAGCGGAAAAGTGTCGA
TGGTGGTCGGTACGCACGCCATATTCCAGGAACAGGTACAGTTTTCCGGCCTGGCGCTGGTGATCATCGACGAACAGCAC
CGGTTTGGTGTGCACCAGCGGCTGGCTCTGTGGGAAAAGGGCGAGGAGCAAGGCTTCCATGCCCACCAGTTGATCATGAC
CGCCACGCCAATCCCACGCACGCTGGCAATGACCGCCTATGCCGATCTCGATACCTCGGTGATAGACGAACTGCCGCCAG
GCAGGACGCCGGTCACCACCGTCGCCATTCCAGACACTCGGCGTGCCGATATTATCCAGCGGGTAAAAAGCGCCTGTATG
GAAGAAGGCCGGCAGGCGTACTGGGTCTGTACGCTGATCGAGGAATCAGAGTTGCTGGAAGCGCAGGCGGCGGAAGCCAC
TTGGGAAGAATTGAAGACTGCACTGCCCGAACTGAAAGTCGCGCTGGTTCACGGCCGCATGAAGGCGCAGGAAAAGCAGG
CGGTAATGCAGGCCTTTAAACAGGGTGAGTTGCAGCTGTTGGTGGCAACCACAGTGATCGAAGTAGGCGTCGACGTACCG
AACGCCAGTCTGATGATCATCGAAAACCCGGAGCGGCTTGGGTTGGCGCAACTGCATCAGCTACGCGGCCGCGTTGGCCG
TGGCGCAGTGGCATCGCATTGCGTGCTGTTGTACAAAACCCCGCTGAGTAAAACTGCGCAGAAACGTCTGCAGGTTCTGC
GCGACAGTAACGATGGCTTTGTGATTGCCCAGCGCGATCTGGAAATTCGTGGCCCAGGCGAGCTGCTTGGGACGCGCCAG
ACCGGCAGTGCGGAGTTCAAGGTGGCCGATTTGCTGCGCGACCAGGCGATGATACCGGAAGTGCAACGCGTCGCCCGTCA
TATTCATCAGCAGTACCCGGAACATGCCCGCGCCCTGATTGAACGCTGGCTACCGGAGAAAGCGCGCTATTCCAACGCCT
GA

Protein sequence :
MKGRLLDAVALTTLSGVGASQAGKLAKIGLETIQDLLLHLPLRYEDRTRLYPINDLLPGIFATVEGEVLRSDISFGRRRM
LTCQISDGTGLLTMRFFNFNAAMKNSLAAGRRVTAYGEIKRGNHGAEIIHPEYRIQGESSEVELQDSLTPVYPTTEGIRQ
ATLRKLTDQALELLDTCAIAELLPPELSGGLMSLPQALHTLHRPPPDIQLEDLEQGKHPAQKRLILEELLAHNLSMLAVR
AGAQSYQALPLMPDDRLKKQFLAKLPFSPTGAQDRVVADIEADMQKGFPMMRLVQGDVGSGKTLVAALAALRAIAHGKQV
ALMAPTELLAEQHANNFRQWFEPLGLEVGWLAGKQKGKARLAQQEAIASGKVSMVVGTHAIFQEQVQFSGLALVIIDEQH
RFGVHQRLALWEKGEEQGFHAHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRADIIQRVKSACM
EEGRQAYWVCTLIEESELLEAQAAEATWEELKTALPELKVALVHGRMKAQEKQAVMQAFKQGELQLLVATTVIEVGVDVP
NASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQKRLQVLRDSNDGFVIAQRDLEIRGPGELLGTRQ
TGSAEFKVADLLRDQAMIPEVQRVARHIHQQYPEHARALIERWLPEKARYSNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 5e-97 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_4958 YP_004503358.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 60