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Name : SerAS12_4817 (SerAS12_4817) Accession : YP_004503218.1 Strain : Serratia sp. AS12 Genome accession: NC_015566 Putative virulence/resistance : Virulence Product : Pili assembly chaperone Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 5198842 - 5199597 bp Length : 756 bp Strand : - Note : PFAM: Pili assembly chaperone, N-terminal, bacterial; Pili assembly chaperone, C-terminal, bacterial; KEGG: eta:ETA_02620 MrfD protein DNA sequence : ATGAAACGTAATAACACCCTGAAGACGACGGCCATCGCCGTCGCCCTGCTGGGCGCCGCGGTGGCCCAGCAGGCTCAGGC CGCGATTGCCCTGGACCGTACCCGGGTGATTTTCGACGGTGACCAGAAATCGGTCAGCCTGAACATCAGCAACCAGAACA AGCAGTTGCCGTACCTGGCGCAGGGCTGGCTGGAAGACGACAAGGGCAACAAAATCCAGAGCCCGCTGACGGTGTTGCCG CCGGTGCAGCGTGTTGAGCCGGGTAAGCCGAGCCAGGTGAAAATCCAGGCGCTGCCGGCGGCCAAGCAGTTGCCGCAGGA CCGCGAGTCAATCTATTACTTCAACCTGCGTGAAATCCCGCCGAAGAGCGACAAGCCGAACACCCTGCAGATTGCCTTGC AGACGCGCATCAAGCTGTTCTACCGCCCGGCGGCGATAGCCGTGCAGAAAAATACCGACCCGGCGCAAGAGCAACTGACG CTGACCAAACAGGGCGACAAGTACGTGGTGAACAACCCGACGCCGTACTACGTGACCATCGTGGACGCGAGCAGCAAAAA AGACGGCGCCGGCGTGAAGGGCTTTGAGCCGTTTATGGTGCCGCCGAAGGGCAACGCGCCACTGACGGTGAGTGCCGCCA GCGTGGGCAGCGCCCCGGTGCTGACCTATATCAACGATTACGGCGGCCGTCCGCAGTTGACCTTCAGCTGCAGCGGCAGC AGCTGCCAGGTGGTTGTGGATAAGAAGGCATCTTAA Protein sequence : MKRNNTLKTTAIAVALLGAAVAQQAQAAIALDRTRVIFDGDQKSVSLNISNQNKQLPYLAQGWLEDDKGNKIQSPLTVLP PVQRVEPGKPSQVKIQALPAAKQLPQDRESIYYFNLREIPPKSDKPNTLQIALQTRIKLFYRPAAIAVQKNTDPAQEQLT LTKQGDKYVVNNPTPYYVTIVDASSKKDGAGVKGFEPFMVPPKGNAPLTVSAASVGSAPVLTYINDYGGRPQLTFSCSGS SCQVVVDKKAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 3e-55 | 54 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 8e-55 | 53 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 8e-55 | 53 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 7e-55 | 53 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 7e-55 | 53 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 6e-55 | 53 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 5e-55 | 53 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 3e-49 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SerAS12_4817 | YP_004503218.1 | Pili assembly chaperone | VFG1547 | Protein | 5e-55 | 53 |
| SerAS12_4817 | YP_004503218.1 | Pili assembly chaperone | VFG0896 | Protein | 3e-55 | 53 |
| SerAS12_4817 | YP_004503218.1 | Pili assembly chaperone | VFG0885 | Protein | 1e-49 | 52 |
