Name : SerAS12_4732 (SerAS12_4732) Accession : YP_004503134.1 Strain : Serratia sp. AS12 Genome accession: NC_015566 Putative virulence/resistance : Virulence Product : ribokinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : 2.7.1.15 Position : 5102742 - 5103953 bp Length : 1212 bp Strand : - Note : PFAM: Carbohydrate/purine kinase; HTH transcriptional regulator, DeoR N-terminal; KEGG: rah:Rahaq_3574 ribokinase; SMART: HTH transcriptional regulator, DeoR N-terminal DNA sequence : ATGTTTCTCGAAGAACGACGCAATAACATCCTGGATTATCTGGATAAATATGAACGCGTTAGCGTGGCGTACCTGGCCAC GTCTTTTGCAGTGACCAAAGAAACCATCCGCAGCGATTTAAACGTGCTGGCGCAACTGGGGTTAGTGCAGCGCTGCCACG GCGGCGCGATCGTCATCCGCCGCAGCCTGCAGGCCAAATTAATTACCGAAACCGACGGCACGTTCGAAGTGCTGTTAAGG CGCCTGGAAAGCCAGAAAAGAAAGGCGCAGGAGCCGGAGAGAGGAAAAAACATGCGAGGCAAGGTCTGTATTCTGGGGTC ATTCAATGTCGATATCGTCGCCAGGGTGGCGCGCTTTCCCAAAGGCGGCGAATCGCTGCTGGCGCTCGGCAGTACGCTCG GCCCCGGCGGCAAGGGGGCCAATCAGGCGATGGCCGCCAGCCGGGCCGGCGCTCTGGTGCATTTCGTGTCCAAAGTCGGC AAAGATCAGTTCAGTCAGTTCGCTTTCGACCACCTCTCTGCGTCGGAAATCCACTCGTTCACTTTATACCAGTCGGAAAC CGAGCCGACCGGCAATGCCATCATTTATGTTTCGCAGCAGGACGGCGAGAACATGATCGCCATTTATTCCGGCGCGAATA AAACCATCACCGACGAAGAAGTGGCTGCAATTGCCCCGGAACTGGCCGGCGCAGAGGTTCTGCTGGTGCAGCTGGAGAAT AACTTTAACGCCACGTTGAACGCGATGAAGCTGGCTAATGCGTTGGGGATCCGGGTGATCCTCAATCCTGCGCCTTACTC CGCCGACGCGCTGCAATGCCTGGAATATGTCGATGTGATCACCCCGAATGAAACCGAGGCCTCGCTGCTGTCCGGCGTGG AGGTCACGGATCTGAACAGCGCCAAAGAGGCGGCGCAGCGTATCGCCGGGCTGGGCGCCCGACGGGTCATCATCACCATG GGCGCGCGTGGAGCGATGATCCTCGAAGGTTCGCAGTTCCAGCACATTCCCGCGTTCCCGGCGTTGAGCGTCGATACCAC CGGCGCGGGAGATGCGTTCAACGGCGCCTTCGCTGCGGCTATCGCCACCGGGCAAACGATTGCCCAGGCGGCAACCTATG CCGCCGCCTTTGCGTCACTGGCGGTGGAAAGAGAAGGGGCGTCCAACATGCCGCAACATCAACAGGTGGTGGCTCGTCTG AGCCAGCGCTGA Protein sequence : MFLEERRNNILDYLDKYERVSVAYLATSFAVTKETIRSDLNVLAQLGLVQRCHGGAIVIRRSLQAKLITETDGTFEVLLR RLESQKRKAQEPERGKNMRGKVCILGSFNVDIVARVARFPKGGESLLALGSTLGPGGKGANQAMAASRAGALVHFVSKVG KDQFSQFAFDHLSASEIHSFTLYQSETEPTGNAIIYVSQQDGENMIAIYSGANKTITDEEVAAIAPELAGAEVLLVQLEN NFNATLNAMKLANALGIRVILNPAPYSADALQCLEYVDVITPNETEASLLSGVEVTDLNSAKEAAQRIAGLGARRVIITM GARGAMILEGSQFQHIPAFPALSVDTTGAGDAFNGAFAAAIATGQTIAQAATYAAAFASLAVEREGASNMPQHQQVVARL SQR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
orf408 | NP_460347.1 | regulatory protein | Not tested | SPI-2 | Protein | 9e-63 | 49 |
ORF 408 | CAB37417.1 | - | Not tested | SPI-2 | Protein | 7e-63 | 49 |
rbsk | YP_216390.1 | DeoR family transcriptional regulator | Not tested | SPI-2 | Protein | 4e-62 | 49 |
APECO1_1076 | YP_853096.1 | carbohydrate kinase | Not tested | PAI IV APEC-O1 | Protein | 2e-64 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SerAS12_4732 | YP_004503134.1 | ribokinase | VFG0483 | Protein | 4e-63 | 49 |