Gene Information

Name : SerAS12_4716 (SerAS12_4716)
Accession : YP_004503118.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 5082903 - 5085227 bp
Length : 2325 bp
Strand : +
Note : KEGG: spe:Spro_4627 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold

DNA sequence :
ATGAATGACCCACTGAGCCGCATTATTGCAACAGAACTGCAGGCCCGGCCGGAGCAAGTTGACTCCGCCATCCGTCTGCT
GGATGAAGGTAATACCGTGCCTTTTATCGCACGCTATCGTAAGGAAGTCACCGGGGGCCTGGACGACACCCAACTGCGCC
AGCTGGAAACCCGCCTGGGTTATCTGCGTGAACTGGAAGACCGCCGTCAGACCATCCTCAAATCGATCGACGAGCAGGGT
AAACTGACCGAACAGCTGGCGGGGGCGATCAACGCCACGCAAAGCAAAACCGAGCTCGAAGACCTCTACCTGCCGTACAA
ACCCAAACGTCGTACCCGTGGCCAAATCGCTATCGAAGCCGGCCTGGAGCCATTGGCCGACACCCTGTGGCAGGATCCGC
AGCAACAGCCGGAACAGTTGGCCGAAGGCTACGTTGACGCCGACAAGGGCGTGGCGGATGTCAAAGCCGCCCTCGACGGC
GCGCGTTACATCCTGATGGAGCGCTTCGCCGAAGACGCCGCGCTGCTGGCCAAGGTACGTAACTACCTGTGGAAGCACGC
CCACCTGGTGTCCAAAGTGGTGGAAGGCAAAGAAGAAGCCGGTGCCAAGTTCCGCGACTACTTTGATCACCATGAGCCTA
TTGCCCTGGTGCCTTCACACCGTGCATTGGCGATGTTCCGTGGCCGCAACGAAGGCGTGCTGCAGTTGGCGCTGAACGCC
GATCCGCAGTTTGAAGAAGCCCCGCGCGAAAGCCAGGCGGAGCAAATCATCATCAGCCACCTCGACCTGCGCCTGAATAA
CGCCCCGGCCGACGCCTGGCGCAAAGCGGTGGTCAACTGGACCTGGCGCATCAAGGTGCTGTTGCATCTGGAAACCGAAT
TGATGGGCACGGTGCGCGAACGCGCGGAAGACGAAGCCATCAACGTTTTCGCCCGTAACATGCAGGATCTGCTGATGGCC
GCACCGGCCGGCATGCGCGCCACCATGGGCCTGGACCCCGGTCTGCGCACCGGGGTAAAAGTGGCGGTGGTGGATGCAAC
CGGCAAGCTGGTTGCCACCGATACCGTCTACCCGCACACCGGCCAGGCCGCAAAAGCCGCCGCCATCGTCGCCGCGCTGT
GCATCAAACACAAAGTGGAGCTGGTTGCTATCGGCAACGGCACAGCGTCGCGTGAGACGGAGCGTTTTTACCTTGAATTG
CAGCAGCAGTTCAGCGACGTCAAAGCGCAGAAGGTGATCGTCAGCGAAGCCGGCGCCTCGGTGTATTCCGCCTCCGAACT
GGCGGCGCTGGAATTCCCGAACCTCGACGTCTCGCTGCGCGGGGCCGTCTCCATCGCCCGCCGTTTGCAGGATCCGCTGG
CCGAGCTGGTCAAAATCGACCCGAAATCCATCGGCGTCGGCCAGTACCAGCACGACGTCAGCCAAAGCCAACTGGCGAAA
AAACTGGACTCGGTGGTGGAAGACTGCGTAAACGCCGTCGGCGTCGATCTGAACACCGCCTCAGTGCCGTTGCTGACCCG
CGTGGCCGGCCTGACGCGCATGATGGCGCAGAACATCGTTACCTGGCGTGATGAAAACGGCCGCTTCAGCAACCGCGAAC
AACTGCTGAAAGTCAGCCGCCTGGGGCCGAAAGCCTTTGAACAGTGCGCCGGCTTCCTGCGCATCAACCACGGCGACAAC
CCGCTGGATGCCTCAACCGTTCACCCGGAAACCTACCCGGTGGTCGAACGCATTCTGGCCGCCACCCGGCAGGCGCTGCA
GGATTTGATGGGTAACCCGGCAGCAGTGCGCAGTCTGAAGGCCAGCGACTTCACCGACGACAAATTCGGTGTACCGACGG
TCACCGACATCCTGAAAGAGTTGGAGAAACCGGGCCGCGATCCGCGTCCGGAATTCAAAACCGCCACCTTTGCCGAGGGC
GTGGAAACCCTCAACGATCTGCAGCCGGGCATGATTTTGGAAGGTTCGGTCACTAACGTCACCAACTTCGGCGCCTTTGT
GGATATCGGCGTACATCAGGACGGCTTGGTGCATATCTCCTCGCTGGCGGACAAGTTCGTCGAAGATCCGCACACCGTGG
TGAAAGCCGGCGACATCGTCAAAGTGAAGGTGATGGAAGTGGATCTGCAGCGCAAGCGCATCGCACTGAGCATGCGTCTG
GACGAGCAACCGGGTGAAGGTTCGCCACGTCGCGGTGGCGGCAATGCACCGGCGAAGGATGCCCCATCCCGCGCGCCGGC
CAATAAGGCCAAACCGCGCAACAGTTCACCGGCCGGCAACAGCGCCATGGGTGATGCGCTGGCTGCGGCATTCGGTAAGA
AATAG

Protein sequence :
MNDPLSRIIATELQARPEQVDSAIRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLGYLRELEDRRQTILKSIDEQG
KLTEQLAGAINATQSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADTLWQDPQQQPEQLAEGYVDADKGVADVKAALDG
ARYILMERFAEDAALLAKVRNYLWKHAHLVSKVVEGKEEAGAKFRDYFDHHEPIALVPSHRALAMFRGRNEGVLQLALNA
DPQFEEAPRESQAEQIIISHLDLRLNNAPADAWRKAVVNWTWRIKVLLHLETELMGTVRERAEDEAINVFARNMQDLLMA
APAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTVYPHTGQAAKAAAIVAALCIKHKVELVAIGNGTASRETERFYLEL
QQQFSDVKAQKVIVSEAGASVYSASELAALEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
KLDSVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVTWRDENGRFSNREQLLKVSRLGPKAFEQCAGFLRINHGDN
PLDASTVHPETYPVVERILAATRQALQDLMGNPAAVRSLKASDFTDDKFGVPTVTDILKELEKPGRDPRPEFKTATFAEG
VETLNDLQPGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLADKFVEDPHTVVKAGDIVKVKVMEVDLQRKRIALSMRL
DEQPGEGSPRRGGGNAPAKDAPSRAPANKAKPRNSSPAGNSAMGDALAAAFGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 60