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Name : SerAS12_4555 (SerAS12_4555) Accession : YP_004502957.1 Strain : Serratia sp. AS12 Genome accession: NC_015566 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 4920902 - 4922326 bp Length : 1425 bp Strand : - Note : SMART: ATPase, AAA+ type, core; manually curated; TIGRFAM: DNA helicase, DnaB type; KEGG: spe:Spro_4449 replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal DNA sequence : ATGGCAGGAAAAAAACCAACCAACAAAACATACGCGGACGAAGCCAGAGATCGCCCCCGAGATCGCCAGATGGAAGGGCT GAAGATGCCGCCACATTCGCTGGAGGCGGAACAGTCCGTGTTGGGCGGTTTGATGCTGGATAACGAACGCTGGGATAACG TATCGGAACGCGTGGTCTCCAACGATTTCTTCAGCCGCCCGCACCGCCTGATCTTTACCGAGATGCAGCGGCTGTTGGAA ATGAGCCGGCCTATCGATCTGATCACCCTGTCCGAATCGCTCGAGCAGCGCGGCGAACTGGATTCGGTGGGCGGTTTCGC CTATCTGGCCGAACTGTCGAAAAACACCCCAAGCGCCGCCAACATCGGCGCTTATGCCGACATCGTGCGTGAACGTGCGG TCGTGCGCGAAATGATCTCGGTAGCCAATGAGATCGCCGACGCCGGTTATGATCCGCAGGGCCGCAGCAGCGAAGATCTG CTCGATCTGGCCGAATCACGGGTATTCCAGATCGCGGAAAATCGCGCCAGTAAAGATGAAGGCCCGAAAGGCATCGAGCG TATTCTGGAAGACACCGTTTCGCGTATCGAGCAGCTGTATCAGCAGCCGCACGACGGCGTTACCGGGGTAGACACCGGCT ATCAGGATCTCAACAAGAAAACCGCCGGTTTGCAAAAATCGGACCTGATCATTGTCGCCGCCCGTCCTTCGATGGGTAAA ACCACTTTCGCCATGAACCTGTGCGAACACGCCGCGATGACGCAGGAAAAGCCGGTGCTGATCTTCAGCCTGGAGATGCC CGGCAACCAGATCATGATGCGTATGCTGGCGTCGCTGTCGCGCGTCGACCAGACGCGTATCCGTACCGGCCAGCTCGACG ACGAGGACTGGGCGCGCATTTCCAGCACCATGGGTATCCTGCTGGAGAAGCGCAATATGTACATTGATGACTCCTCCGGC CTGACGCCAACCGAAGTGCGCTCCCGCGCGCGCCGTATTTTCCGCGAGCATGACGGCCTCAGTATGATCATGATCGACTA CCTGCAGTTAATGCGCGTGCCGGCCCTGTCCGACAACCGTACGCTGGAAATTGCCGAAATTTCCCGCTCGCTGAAGGCGT TGGCGAAAGAGTTGCAGGTACCGGTGGTGGCGCTGTCGCAGCTGAACCGAAGCCTGGAGCAGCGTGCCGATAAACGCCCG GTCAACTCAGACCTGCGTGAGTCTGGTTCCATCGAGCAGGATGCTGACCTGATCATGTTCATCTACCGTGATGAGGTTTA TCACGAGAACAGCGACATGAAAGGGATTGCCGAAATTATTCTGGGTAAACAGCGTAACGGCCCGATCGGTACCGTGCGCT TGACCTTTAACGGCCAGTGGTCGCGTTTCGATAACTACGCGGGGCCACAATATGATGATGAATAA Protein sequence : MAGKKPTNKTYADEARDRPRDRQMEGLKMPPHSLEAEQSVLGGLMLDNERWDNVSERVVSNDFFSRPHRLIFTEMQRLLE MSRPIDLITLSESLEQRGELDSVGGFAYLAELSKNTPSAANIGAYADIVRERAVVREMISVANEIADAGYDPQGRSSEDL LDLAESRVFQIAENRASKDEGPKGIERILEDTVSRIEQLYQQPHDGVTGVDTGYQDLNKKTAGLQKSDLIIVAARPSMGK TTFAMNLCEHAAMTQEKPVLIFSLEMPGNQIMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKRNMYIDDSSG LTPTEVRSRARRIFREHDGLSMIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRP VNSDLRESGSIEQDADLIMFIYRDEVYHENSDMKGIAEIILGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-98 | 53 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 5e-104 | 52 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-104 | 52 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-103 | 52 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 3e-100 | 50 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-89 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-89 | 49 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-85 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 2e-79 | 46 |
