Gene Information

Name : SerAS12_4468 (SerAS12_4468)
Accession : YP_004502870.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : KpsF/GutQ family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 4823864 - 4824850 bp
Length : 987 bp
Strand : +
Note : TIGRFAM: KpsF/GutQ; KEGG: spe:Spro_4362 D-arabinose 5-phosphate isomerase; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core

DNA sequence :
ATGTCGAACATTCAGTTGCAACCAGGCTTTGATTTTCAACAGGCAGGCAAAGAAGTGCTGCAGATTGAGCGTGACGGGCT
GGCCCAGCTCGATCGGTACATCAATGCAGACTTTACCCGCGCCTGCGAATTGATCGCCGGCTGTTGCGGTAAAGTGGTCG
TGATGGGCATGGGTAAATCCGGGCATATTGGTTGCAAGATTGCCGCGACCTTCGCCAGCACCGGCACGCCTTCATTCTTT
GTTCATCCGGCGGAGGCCAGCCACGGCGACCTCGGCATGGTGACGGCACAAGATATCGTGCTCGCCATTTCCAACTCCGG
TGAGTCCAACGAGATCCAGGCCCTCATCCCGGTCTTGAAGCGCCAGCAAATCCCGCTGATCTGCATGACCAACAACCCGG
AAAGTTCGATGGGTAAAGCGGCGGATATTCACCTGTGCATCAAGGTGCCGCAGGAGGCCTGCCCGCTTGGCCTGGCACCA
ACCACCAGCACCACCGCGACCCTGGTGATGGGTGATGCGCTGGCGGTGGCATTGCTGAAAGCCCGCGGTTTCACGCCGGA
AGATTTTGCACTGTCGCACCCCGGTGGCGCCCTGGGCCGCAGATTGTTGCTGCGCGTTTGCGACATCATGCACAGCGGCG
ACGAAATCCCGCACGTCAGCGCCGATGCATCGCTGCGCGACGCGTTGCTGGAAATCACGCGCAAAAACCTGGGCATGACG
GTCATCTGCGACGATCTGATGAAAATCGCCGGTATCTTTACCGATGGTGACCTGCGGCGGATATTTGATATGGGCATCAA
CCTCAATGAAGCCCGGATCGTCGATGTCATGACGCTCGGCGGCGTGCGGGTGCGCCCGAACCTGCTGGCGGTCGATGCGT
TGAACCTGATGCAACAGCGCCATATCACCGCGCTGCTGGTTGCCGATGGCGACCAATTGCTGGGTGTGGTACATATGCAT
GACATGCTGCGCGCCGGCGTCGTTTAA

Protein sequence :
MSNIQLQPGFDFQQAGKEVLQIERDGLAQLDRYINADFTRACELIAGCCGKVVVMGMGKSGHIGCKIAATFASTGTPSFF
VHPAEASHGDLGMVTAQDIVLAISNSGESNEIQALIPVLKRQQIPLICMTNNPESSMGKAADIHLCIKVPQEACPLGLAP
TTSTTATLVMGDALAVALLKARGFTPEDFALSHPGGALGRRLLLRVCDIMHSGDEIPHVSADASLRDALLEITRKNLGMT
VICDDLMKIAGIFTDGDLRRIFDMGINLNEARIVDVMTLGGVRVRPNLLAVDALNLMQQRHITALLVADGDQLLGVVHMH
DMLRAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 6e-40 44
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-40 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 3e-40 44