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Name : SerAS12_4347 (SerAS12_4347) Accession : YP_004502749.1 Strain : Serratia sp. AS12 Genome accession: NC_015566 Putative virulence/resistance : Unknown Product : polypeptide-transport-associated domain-containing protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2831 EC number : - Position : 4687965 - 4689680 bp Length : 1716 bp Strand : - Note : PFAM: Polypeptide-transport-associated, ShlB-type; Haemolysin activator HlyB; KEGG: epy:EpC_28900 hemolysin activator protein DNA sequence : ATGCGCGTCTCTGCTTATTCTTCGCTCAGCCTTGCTGTGCGCAAGGGGTGTATTCCATTTGGCTCTGTTGTCTTGCCGCT GTTTATATTCAATCAACCGGTTCTGGCGGCAGCGCCAAATGGCGATCAGCTGATCATACAGCAGCAGAGGCAAAAAGCGC TGGAACAGCAGCTAACCCCCCCGACGCCGGATGTGCGGCTGTCGCCGCCTTCGTCCGGTTTTGGCCGCATTGCGTTCCCG CAGGAAAAACCCTGCTTCCCTATCGAACAGGTCGTTCTGACCGGCCAGGACAAACTCCCGCATTGGCTGCCGTTGCAGCG CATTGCCACCCAGGCGCAGGGCCAGTGCCTGGGCGGGCAGGGCATCAACCTGTTGATGAGCACCCTGCAGAACCGACTGG TGGATAGCGGCTATATCACCACGCGCGTGCTGGCGCCGACGCAGGATCTGAAAAGCGGCAAGCTGCGGCTGGTGGTAGTG CCCGGCTATGTGCGCCAGGTGAAACTGACGCCGGACAGCGGCCGCTACATTCAACCCTACAGCAGCTTCCCGGCTCATGC CGGCAACTTGCTGGACTTGCGTGATATCGAGCAGGGGCTGGAAAACCTGCAGCGCCTGCCGACGGTGCAGGCCAACATGG AAATCATCCCCGGCGAGCAGCCCGGCGAAAGCGATATCGCCCTGAGCTGGAAGCAAGAACGCATGTGGCGCGTTGGCGCC TCGCTGGATGACTCCGGCACCAAGAGCACCGGTCGCTATCAGGGCGGCCTGACGCTATCTTTGGATAACCCGTTCTCGCT CAGCGATCTGTTCTACATCTCCGGCACCACTGACCTGCAAAACCAGGGCGGCAGAGGCACCAAAAACATCACCGGCCATT ATTCGGTACCGTTCGGCTACTGGATGGCCGGGGTGACCGCCAACAGTTATGACTATCACCAGACCATCGCCGGGCAGAAT CAGGATTACCGCTACAGCGGCAAGAGCAAGAACCTGGATTTCCAGCTCAGCCGGGTGCTGCACCGTAACGGCAGCCAGAA AACCACGCTGACCTATGACGTGTTGGCGCGCGAATCCAGCAACTACATCAACGATACCGAAGTGGAAGTGCAGCGCCGCC GCACCTCCGGCTGGCGGCTGGGCTTGCAGCACCGCCATTACATCCAGCAGGCCACGCTGGATGCCGGCGTCAGCTATCAG CGCGGCACTCGCTGGTTCGGCGCATTGCCTGCGCCGGAAGAGACCTTTGGCGAGGCCACGGCGCTCAGCAAAATCGTGCA GCTCAACGCCCAGCTTGACGTGCCGTTCAGCCTGTTCAGCCAGAACTTCAGATACAACGTGCAGTACCAGCGCCAGATCA GCGATACCCCGCTGACGCCGCAGGATCAGTTTGCTATCGGCAACCGCTGGACGGTACGCGGCTTTGACGGCGAACGCACC CTGAACGCCAATCACGGCTGGTTCGTGCGCAACGATCTGGCCTGGCGCACGCCGCTGCCGGGGCAAGAACTGTACCTGGG GGCTGACTATGGCGAAGTGGGCGGTTACGGCACCGATTACCTGGTCGGGCAACACCTGGCGGGTGGGGTGGTCGGCCTGC GCGGTTACGCCTTCAAGGTGGGTTACGACCTGTTCGCCGGCGTGCCGTTCTCCAAACCGGACGGCTTCAGCACCAGCCCG GTGACGCTGGGCTTTAACCTGAGCTGGAACTACTGA Protein sequence : MRVSAYSSLSLAVRKGCIPFGSVVLPLFIFNQPVLAAAPNGDQLIIQQQRQKALEQQLTPPTPDVRLSPPSSGFGRIAFP QEKPCFPIEQVVLTGQDKLPHWLPLQRIATQAQGQCLGGQGINLLMSTLQNRLVDSGYITTRVLAPTQDLKSGKLRLVVV PGYVRQVKLTPDSGRYIQPYSSFPAHAGNLLDLRDIEQGLENLQRLPTVQANMEIIPGEQPGESDIALSWKQERMWRVGA SLDDSGTKSTGRYQGGLTLSLDNPFSLSDLFYISGTTDLQNQGGRGTKNITGHYSVPFGYWMAGVTANSYDYHQTIAGQN QDYRYSGKSKNLDFQLSRVLHRNGSQKTTLTYDVLARESSNYINDTEVEVQRRRTSGWRLGLQHRHYIQQATLDAGVSYQ RGTRWFGALPAPEETFGEATALSKIVQLNAQLDVPFSLFSQNFRYNVQYQRQISDTPLTPQDQFAIGNRWTVRGFDGERT LNANHGWFVRNDLAWRTPLPGQELYLGADYGEVGGYGTDYLVGQHLAGGVVGLRGYAFKVGYDLFAGVPFSKPDGFSTSP VTLGFNLSWNY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 0.0 | 73 |
| NMB1762 | NP_274762.1 | hemolysin activation protein HecB | Not tested | IHT-C | Protein | 5e-92 | 43 |
