Gene Information

Name : SerAS12_4337 (SerAS12_4337)
Accession : YP_004502739.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : virulence-related outer membrane protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3637
EC number : -
Position : 4670640 - 4671215 bp
Length : 576 bp
Strand : -
Note : PFAM: Virulence-related outer membrane protein; KEGG: ent:Ent638_3136 virulence-related outer membrane protein

DNA sequence : 
ATGAAGAAATTAGTTATCGCCAGTATGGTTATTTCCACTCTGGGTCTCAGTGCTGCGGCGAATGCCGGGCAAAGCACCCT
TAGCGTCGGTTATGCGCAAAGCAAGGTGCAGGATTTCAAAAATATCAATGGCGTTAACCTCAAGTACCGTTACGAGTGGG
ATTCACCGCTCAGCGTTATCAGTTCCTTTACCTATATGAGCGGGGATCAAAACGAGTCTTACTATGTTGAGCGCGACATT
ATCGATAACCACGCAGAAGTCAAATATTACTCTTTATCGGTTGGCCCGGCGTACCGTTTTAATCAATATATCAGCGTCTA
TGGCCTGTTGGGCCTGAATTATAACAAGGTTGATTATAAGTCATCCTGGAATAACTACGCCAACAACGCTTACGAGTATA
TGGGCGACGAGAGCGGCAGCGAGAAGAAAACCTCCTTGATGTATGGTGCCGGTTTCCAGCTCAACCCAATGGAGAATCTG
GCGATTGATATTGGCTATGAAGGCTCAAGACTGAATATCGACGGCAGGAATCTTTCGATCAACGGTTTCAATATCGGCGT
TGGCTATCGTTTCTGA

Protein sequence : 
MKKLVIASMVISTLGLSAAANAGQSTLSVGYAQSKVQDFKNINGVNLKYRYEWDSPLSVISSFTYMSGDQNESYYVERDI
IDNHAEVKYYSLSVGPAYRFNQYISVYGLLGLNYNKVDYKSSWNNYANNAYEYMGDESGSEKKTSLMYGAGFQLNPMENL
AIDIGYEGSRLNIDGRNLSINGFNIGVGYRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 9e-34 51
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 2e-34 51
pagC AGI37337.1 PagC Virulence OI-122 Protein 2e-24 50
pagC AGI37342.1 PagC Virulence OI-122 Protein 2e-24 50
pagC AGI37344.1 PagC Virulence OI-122 Protein 2e-24 50
pagC AGI37346.1 PagC Virulence OI-122 Protein 2e-24 50
pagC AGI37350.1 PagC Virulence OI-122 Protein 2e-24 50
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 5e-33 50
pagC AGI37340.1 PagC Virulence OI-122 Protein 4e-25 49
pagC AGI37347.1 PagC Virulence OI-122 Protein 4e-25 49
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 2e-30 48
pagC AGI37352.1 PagC Virulence OI-122 Protein 3e-24 48
pagC AGI37343.1 PagC Virulence OI-122 Protein 5e-24 48
pagC AGI37353.1 PagC Virulence OI-122 Protein 5e-24 48
pagC AGI37348.1 PagC Virulence OI-122 Protein 1e-24 48
pagC AGI37341.1 PagC Virulence OI-122 Protein 3e-24 48
pagC AGI37351.1 PagC Virulence OI-122 Protein 1e-24 48
pagC AGI37349.1 PagC Virulence OI-122 Protein 3e-24 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_4337 YP_004502739.1 virulence-related outer membrane protein VFG0442 Protein 2e-24 42