Gene Information

Name : SerAS12_4187 (SerAS12_4187)
Accession : YP_004502592.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : 3.6.3.34
Position : 4475744 - 4476541 bp
Length : 798 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: spe:Spro_3978 iron-hydroxamate transporter ATP-binding subunit; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGCAGGATAAACACCTCGATCACGACGCCACTTTCGCGTTAGACAACGTCAGCTTTGCCGTTCCCGGCCGCGTGCTGTT
GCAACCGCTGTCGCTGACCTTTCCCCAGGGAAAAGTCTGTGGGCTGATCGGCCACAATGGTTCCGGCAAATCCACATTGC
TGAAAATTCTTGGTCGCCATCAGAACCCGACCGCCGGCAGCGCGCAGCTTAACCGACGCCCGCTGGCGCAATGGGACAGT
AAAGCCTTCGCGCGTCAGGTCGCCTATCTGCCCCAGCAACTGCCCGCCGCAGAAGGCATGACGGTACGCGAGCTGGTGGC
GATCGGCCGCTATCCGTGGCACGGCGCGCTGGGCCGCTTTGGCGTGAACGACCGCGAACAGGTGGAAGAAGCGATAGCGT
TGGTTGGCCTGAAACCCTTCGCCAATCGCCTGGTGGACAGCCTGTCCGGCGGCGAGCGGCAACGCGCCTGGCTGGCGATG
ATGGTGGCGCAGGACAGCCGCTGCCTGCTGTTGGACGAACCGACCTCTGCGCTGGACATTGCGCACCAGGTTGAGGTGTT
GGCGCTGATTCAACGCCTGAGCCATGAACGTGGCCTGACGGTGATTGCGGTGCTGCATGACATCAACATGGCGGCGCGCT
ATTGCGATCATCTGGTGGCGTTGCGCGGTGGCGAGATGATTGCGCAAGGTGCCCCGCTGGAACTGATGCAAGGGCCGGTG
CTGGAGCAAATTTATGGTATTCCAATGGGCACGCTGGCGCATCCGAGCGGCGGTGCGCCGGTGAGTTTTGTCTACTGA

Protein sequence : 
MQDKHLDHDATFALDNVSFAVPGRVLLQPLSLTFPQGKVCGLIGHNGSGKSTLLKILGRHQNPTAGSAQLNRRPLAQWDS
KAFARQVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGVNDREQVEEAIALVGLKPFANRLVDSLSGGERQRAWLAM
MVAQDSRCLLLDEPTSALDIAHQVEVLALIQRLSHERGLTVIAVLHDINMAARYCDHLVALRGGEMIAQGAPLELMQGPV
LEQIYGIPMGTLAHPSGGAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-41 42
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-41 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_4187 YP_004502592.1 iron-chelate-transporting ATPase BAC0164 Protein 3e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_4187 YP_004502592.1 iron-chelate-transporting ATPase VFG0925 Protein 9e-43 43
SerAS12_4187 YP_004502592.1 iron-chelate-transporting ATPase VFG1042 Protein 3e-41 42