Gene Information

Name : SerAS12_4119 (SerAS12_4119)
Accession : YP_004502526.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4401617 - 4402285 bp
Length : 669 bp
Strand : +
Note : KEGG: spe:Spro_3910 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region

DNA sequence : 
GTGAACATTTTGCTTGTGGAAGACGATCTGCAATTGGGCAAAGCCCTGTGCCGCGCATTGGAACTGGCAGGGTTCGATCT
GTGCTGGGTGCGGCTGGTCCATGATGCACAACTTCAATTATCGCAGGGCAGCTTCGATTTAATGCTGCTGGATCTGACCC
TGCCCGATGGCGACGGCTTGACGAAACTGGTCGAATGGCGCGCCGCCGGACAAAATATTCCGATCATTATTCTGACCGCC
CGCGACCGCATCGAGAGTCTGGTCAATAGCCTGGACTCCGGTGCCGACGACTTTCTGGCAAAACCTTTTGCGCTGCCGGA
ACTGATTTCGCGCGTGAAGGCGGTGAACCGACGCATGGCCGGGTTCGCCTCCCAAACCTGGAGCCTCGGTAATCTGTATC
TGGACCCGATGAACCATCAGGTCACCTTGGAAGACGAACTGTTGCTGTTATCAAAAAAAGAGTACCGACTGCTGCATGAG
CTGATGCGCTGCGCCGGAACCGTAGTGCGCAAAGCCACATTGGAACAGCGGCTGTTCGGCAATGGCGACAGCGTGGAAAG
TAATTCTCTGGAGGTGCACATGCATAACCTGCGACGCAAGATCGGCAAGGAAAGAATTATTACCGTGCGCGGCATCGGCT
ATTTATTAAAAAAAGAGACGCAGGGATGA

Protein sequence : 
MNILLVEDDLQLGKALCRALELAGFDLCWVRLVHDAQLQLSQGSFDLMLLDLTLPDGDGLTKLVEWRAAGQNIPIIILTA
RDRIESLVNSLDSGADDFLAKPFALPELISRVKAVNRRMAGFASQTWSLGNLYLDPMNHQVTLEDELLLLSKKEYRLLHE
LMRCAGTVVRKATLEQRLFGNGDSVESNSLEVHMHNLRRKIGKERIITVRGIGYLLKKETQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-19 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_4119 YP_004502526.1 winged helix family two component transcriptional regulator BAC0487 Protein 5e-24 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_4119 YP_004502526.1 winged helix family two component transcriptional regulator VFG0473 Protein 4e-19 44