Gene Information

Name : SerAS12_4101 (SerAS12_4101)
Accession : YP_004502508.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase xerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4385784 - 4386683 bp
Length : 900 bp
Strand : -
Note : TIGRFAM: Tyrosine recombinase XerD; HAMAP: Tyrosine recombinase xerD; KEGG: spe:Spro_3892 site-specific tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence : 
GTGCAACAGCAAGAGAGTGCGCTGATTGAGCAATTCCTGGATGCGCTGTGGCTCGAACGCAATCTGGCAGAAAATACGCT
GGCCTCTTACCGGCTGGATCTGCAGGCGCTGACCGCCTGGCTGAACCATCAAAATACCTCACTGTTACAGGCGCAGGCGC
TGGATTTGCAGGCGTTTCTCGCCGAACGGGTGGAGGGGGGCTACAAGGCAACCAGCTCTGCGCGTTTGCTGAGCGCCATG
CGCCGCCTGTTCCAGTATCTGTACCGTGAAAAACTGCGGGAAGACGATCCGACCGCGTTGCTCGCGTCGCCGAAGTTGCC
GCAGCGGCTGCCGAAAGATTTGAGCGAAGCGCAAGTCGATGCCTTGTTGCAGGCGCCATGCGTCGATCAGCCTCTGGAGC
TGCGAGACAAGGCGATGCTGGAGGTGCTGTACGCCACCGGTTTGCGGGTGTCCGAACTGGTCGGGCTGACCATCAGCGAC
GTCAGCCTGCGCCAGGGCGTGGTGCGGGTGATCGGTAAAGGCAACAAGGAACGGCTGGTGCCGCTGGGCGAGGAGGCGGT
GTACTGGATAGAAAATTATCTGGAGCACGGTCGCCCGTGGATGGTCAACGGCCAGGCGCTGGATGTGCTGTTCCCAAGCA
ACCGCTGCCAGCAAATGACCCGACAGACGTTCTGGCATCGCATCAAACACTATGCGATCCTAGCGGGTATTGATAGCGAG
AGGCTGTCACCGCACGTGTTGCGTCACGCATTTGCCACCCATTTGCTGAACCACGGAGCCGATCTCCGTGTCGTACAGAT
GTTATTGGGGCACAGCGACCTCTCGACCACGCAAATTTACACGCATGTAGCGACCGAACGACTTAAACAGCTACATCAAC
AGCATCACCCGCGTGCGTGA

Protein sequence : 
MQQQESALIEQFLDALWLERNLAENTLASYRLDLQALTAWLNHQNTSLLQAQALDLQAFLAERVEGGYKATSSARLLSAM
RRLFQYLYREKLREDDPTALLASPKLPQRLPKDLSEAQVDALLQAPCVDQPLELRDKAMLEVLYATGLRVSELVGLTISD
VSLRQGVVRVIGKGNKERLVPLGEEAVYWIENYLEHGRPWMVNGQALDVLFPSNRCQQMTRQTFWHRIKHYAILAGIDSE
RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-59 60
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-59 60