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Name : SerAS12_3963 (SerAS12_3963) Accession : YP_004502371.1 Strain : Serratia sp. AS12 Genome accession: NC_015566 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 4229446 - 4231602 bp Length : 2157 bp Strand : - Note : KEGG: spe:Spro_3773 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase, N-terminal; Orn/Lys/Arg decarboxylase, C-terminal DNA sequence : ATGAATATCATCGCAATCATGAGCCCAACGGGCGTCTATTACAAAGATGAGCCTATTCGTGAGCTGCACACTGCATTGGC TACGATGGGTTTCCAGTTGGTTTACCCGAAGAATGGCGGCGATCTGCTGAAGCTGATCGAGGCCAATGCGCGTATTTGCG GAGTGATTTTCGACTGGGACGACTACAGCCTGGAGCTGTGCAGCGAAATTAACGAGCTGAATGAATATCTACCGCTATAT GCGTTTATCAACCAGTATTCCACCTTCGACGTCAGTCTTCATGAAATGCGCATGGTGCTGTATTTCTTTGAGTATGGCTT GAATGCGGCAGATGATATTGCGCAGCGTATCCAGCAATACACCGCAGAATATATCGACACCATTACGCCGCCCTTAACCA AGGCACTATTCAACTACGTGCGCGAGGGCAAATACACCTTTTGCACCCCAGGGCATATGGCCGGCACTGCCTTCCAGAAA AGCCCGGTTGGCTGCCTGTTTTACGATTTTTTCGGTGCGAACACCTTAAAAGCCGACGTCTCCATATCGGTGACCGAACT GGGTTCGCTGCTGGACCATACCGGCCCGCATCTGGAGGCCGAAGAGTATATTGCGCGTACCTTTAACGCCGAGCAGAGCT ATCTGGTGACCAACGGCACCTCCACCGCCAACAAGATTGTCGGCATGTATTCGGCCCCGGCAGGCAGCACGGTGTTGATT GACCGCAACTGCCATAAATCGCTGTGTCATCTGCTGATGATGAGCGATATCGTCCCGATCTACCTGCGTCCGCTGCGTAA CGCCTACGGCATTCTTGGTGGCATCCCGCAGCATGAATTTACCCATGAGAGCATTGCCGGTCGAGTCGCCGCCACCGCGA ATGCCAGTTGGCCGGTACATGCGGTGATTACCAACTCAACCTATGACGGCCTGCTGTATAACACCGATTACATCAAGCAG ACGTTGGACGTGCCATCAATCCATTTTGACTCCGCCTGGGTACCCTATACCAACTTCCATCCGATCTACGAAGGCAAGAG CGGCATGAGCGGCGAGCGCACGCCCGGCAAGGTGATCTACGAAACGCAGTCCACGCACAAGCTGCTGGCGGCATTCTCGC AGGCCTCGATGATTCACATTAAAGGCGATTACGACGAAAGCACCTTTAACGAAGCCTATATGATGCATACCACCACTTCG CCGAACTACGGCATTGTGGCGTCGATGGAGACTGCCGCCGCGATGCTGCGCGGCAATCCTGGCCGGCGGTTGATTAACCG CTCGGTAGAGCGTGCATTGCATTTCCGTCGTGAGGTGCAGCGGTTGCGGGAGGAGAGCGATAGCTGGTTCTTCGATATCT GGCAGCCTGAAGAGATCGACGAGGCGCAATGCTGGCCGTTGAACCCGGACGATAATTGGCATGGGTTTGGCAATACCGAC AGCGATCACATGTATCTCGATCCGATCAAAGTGACGATCCTGACGCCGGGAATGAACGAACTGGGTACGCTGGAGGGGAG CGGGATCCCGGCGGCGCTGGTGGCGAAATACCTGGACGAGCGCGGCATCGTGGTGGAAAAAACCGGGCCTTATAATCTGC TGTTCCTGTTCAGTATCGGCATTGATAAAACCAAGGCGATGAGCCTGCTGCGTGGCCTGACCGATTTTAAACGCGCTTAC GATCTTAATCTGCGGGTGAAGAACATGCTGCCGGATCTGTATGCGGAGGATCCTGATTTCTATCGCAATATGCGCATTCA GGATCTGGCAGCCGGGATCCACCGGTTGATCTGCCTGCACGATCTGCCGCGGCTGATGCTGCGGGCGTTCGACGTGCTGC CGGAAATGAAGCTGACGCCACACCAAATGTTCCAGCAGCAGGTACGTGGCAATGTGGAAACCTGCGAACTGGATCAACTG GTGGGCAAGGTGGCGGCCAATATGATCCTGCCTTATCCACCAGGCGTGCCGTTAGTGATGCCGGGTGAGATGATCACCGA GGAGAGCCGTGCGGTGCTCGATTTCTTGCTGATGCTGTGTTCTATCGGCGAGCGTTATCCCGGCTTTGAAACCGATATCC ACGGTGCGAAATTGACCGAGGATGGGCGTTATCTGGTGAAGGTACTGAAAACGCCGCCGCCCGATCTCAACGTTTGA Protein sequence : MNIIAIMSPTGVYYKDEPIRELHTALATMGFQLVYPKNGGDLLKLIEANARICGVIFDWDDYSLELCSEINELNEYLPLY AFINQYSTFDVSLHEMRMVLYFFEYGLNAADDIAQRIQQYTAEYIDTITPPLTKALFNYVREGKYTFCTPGHMAGTAFQK SPVGCLFYDFFGANTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPAGSTVLI DRNCHKSLCHLLMMSDIVPIYLRPLRNAYGILGGIPQHEFTHESIAGRVAATANASWPVHAVITNSTYDGLLYNTDYIKQ TLDVPSIHFDSAWVPYTNFHPIYEGKSGMSGERTPGKVIYETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTS PNYGIVASMETAAAMLRGNPGRRLINRSVERALHFRREVQRLREESDSWFFDIWQPEEIDEAQCWPLNPDDNWHGFGNTD SDHMYLDPIKVTILTPGMNELGTLEGSGIPAALVAKYLDERGIVVEKTGPYNLLFLFSIGIDKTKAMSLLRGLTDFKRAY DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAAGIHRLICLHDLPRLMLRAFDVLPEMKLTPHQMFQQQVRGNVETCELDQL VGKVAANMILPYPPGVPLVMPGEMITEESRAVLDFLLMLCSIGERYPGFETDIHGAKLTEDGRYLVKVLKTPPPDLNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 76 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SerAS12_3963 | YP_004502371.1 | lysine decarboxylase | VFG1670 | Protein | 0.0 | 64 |
