Gene Information

Name : SerAS12_3475 (SerAS12_3475)
Accession : YP_004501892.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0753
EC number : 1.11.1.6
Position : 3698212 - 3699648 bp
Length : 1437 bp
Strand : +
Note : KEGG: spe:Spro_3278 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive

DNA sequence :
ATGAGCAAGAAAGGATTGACCACCGCAGCCGGCGCCCCGGTTGTCGATAACAATAATGTGATCACCGCAGGAAAACGCGG
GCCGATGCTACTGCAAGACGTCTGGTTCCTGGAAAAACTGGCCCACTTCGACCGCGAAGTGATCCCCGAGCGCCGCATGC
ACGCCAAAGGCTCCGGCGCCTACGGCACTTTCACCGTCACCCATGATATTACCCAATACACCCGCGCAAAAATCTTCGCT
GAAATCGGCAAGCAAACTGACATGTTCATCCGCTTCTCCACCGTAGCCGGTGAACGCGGCGCAGCAGACGCCGAACGCGA
CATTCGCGGTTTTGCCATGAAGTTTTACACCGACGAAGGCAACTGGGATCTGGTAGGCAACGACACGCCGGTATTCTATC
TGCGCGATCCGCTGAAGTTCCCCGATCTTAACCACGTAGTAAAACGCGATCCGCACACCAACCTGCGCAATCCGGTGTAC
AAATGGGATTTCTTCTCCCATCTGCCGGAATCTTTGCACCAATTGACCATCGATTTCAGCGATCGCGGTATCCCGAAATC
CTATCGCCACATGCATGGTTTCGGCAGCCACACCTTCAGCTTTATCAATGCCAATAACGAGCGTTTCTGGGTGAAATTCC
ACTTCCGCTGCGAACAGGGTATTGAAAACCTGATGGATGAGGAAGCGGAAGCTATCATCGCCAAAGATCGTGAAAGCTCG
CAGCGCGACCTGTTAGACGCAATCAAGCGCGGTGATTTCCCACGATGGAAGTTGCAAATTCAAATCATGCCTGAACACGA
AGCCTCGCAGACACCCTACAACCCGTTTGATCTGACCAAGGTATGGCCGCATGGCGACTACCCGCTGATCGACGTCGGCT
TCTTCGAACTGAACCGCAACCCGGACAACTATTTCTCAGAAGTTGAACAGGTGGCGATGAACCCGGCCAACGTGGTGCCG
GGCGTCAGCTTCTCGCCGGACAAAATGCTGCAGGGCCGCCTGTTCTCTTACGGGGATGCGCACCGTTACCGCCTGGGCGT
TAACCATCACCAAATCCCGGTTAACGCCGCCAAATGCCCGTTCCACAACTATCACCGCGACGGCGCGATGCGCGTGGACG
GCAACAGCGGCAACGGGGCGACCTACGAACCGAACAGCTTCGGCCTGTTCCAGGAACAACCGGACTTCAGCGAACCGCCG
TTGAGCATCGAAGGCGCGGCCGATCACTGGAATCACCGCGAGGATAAGGATTATTTCAGCCAGCCGCGCGCACTGTTTAA
CCTGCTGAGTGCCGAAGAACACCAGCGTATGTTCACCCGTATCGCCGGTGAACTGTCGCAAGTACCGGAACAGATCCAAC
GCCGTCAGGTCGATCTGTTTACCCAGGTGCACCCGGACTACGGCGCCGGCGTCGCCAGTGCGCTTGGCTTGAAGTAA

Protein sequence :
MSKKGLTTAAGAPVVDNNNVITAGKRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAYGTFTVTHDITQYTRAKIFA
EIGKQTDMFIRFSTVAGERGAADAERDIRGFAMKFYTDEGNWDLVGNDTPVFYLRDPLKFPDLNHVVKRDPHTNLRNPVY
KWDFFSHLPESLHQLTIDFSDRGIPKSYRHMHGFGSHTFSFINANNERFWVKFHFRCEQGIENLMDEEAEAIIAKDRESS
QRDLLDAIKRGDFPRWKLQIQIMPEHEASQTPYNPFDLTKVWPHGDYPLIDVGFFELNRNPDNYFSEVEQVAMNPANVVP
GVSFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAAKCPFHNYHRDGAMRVDGNSGNGATYEPNSFGLFQEQPDFSEPP
LSIEGAADHWNHREDKDYFSQPRALFNLLSAEEHQRMFTRIAGELSQVPEQIQRRQVDLFTQVHPDYGAGVASALGLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 0.0 79
katA YP_005126717.1 catalase Not tested Not named Protein 4e-96 52
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 2e-92 42
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 2e-92 42
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 2e-92 42
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 2e-92 42