Gene Information

Name : SerAS12_0300 (SerAS12_0300)
Accession : YP_004498771.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 346880 - 347887 bp
Length : 1008 bp
Strand : +
Note : KEGG: spe:Spro_0349 hypothetical protein; TIGRFAM: integrating conjugative element protein, PFL_4710 family; PFAM: Protein of unknown function DUF1527

DNA sequence :
ATGCAGCGACCCCTTTTGCATGGGATGCCCCCGGAACAACCCCGCCTTACCCTTAAATCCCTCAGTGTGGCCATTATGTT
GACCGCGGCCAGCGTGCCGGCAGCGAACGCTGCGCTCAACAGCGCGCAGATTGTCGCGAGTGCCGTGTCGCAGGCCTGCA
TCAGCTGGCGTGTCAGTGGCATTTGTTATTGGCTGCTGTGCACGCCGTTTGGCTGCAAGGTGCGGACCTCCGTCAAAGTC
ACCCACTATATCCCGGAAGCCGTGGTGTCAGCGTACAACACCCAGGGAGGCAATCCCTGGCGTGAAATGTCGATGGTGAG
TCAGGCTGCCGGCGGGCTGGAAAGCAGTATCACCAGCGGGCTGAGTGGCGTGTCTGCCGGCGGTGGGAACAACGAGCTGA
AAACCCCCGGGGAACGTAAAACCAACCTCCACTTCAAGTATGCCGATGCCATTGGTCATCCGGCAACGTCCCTGATTGGC
GGCAGCATTGCCGGCTATTCGTGCCGCAGCGCGGCGACCCCCTTTGTGCCGTATTTCCTCAGCACGCTGGACAGCCTGGC
GTGGCGTACCGGTATTCCCGAGTCCCTCTACCCGGAGGCGTTGGTTCCGGGGATGCGTGAGGTTGGCAGTCAGGCGGCCG
CGAATATGTGGGGCAACGTCTATCCCCGCTCGGGGTTTGTGACCCAGGTCGATGACGACAAGGCCGGTGCCCTGGTGGCG
CAGCGGGTGGCGGACATCATCACCCGTTCTGGTCAACCCCACGTCTATCAACTCCTGATGGGCCAGCGCTCTGAGGGGTA
CTGGCCTCCAGGCGCTGTGACGGAGAACACCGGTACCAACAACCACAAGTGGCAACGTCTGGCGCCGCAGCTCAGCCAGT
CTTGCGCCGTGTTCCCGGACGGCGACCATCCGCCGGCAGCGGATGCGAACGCTGCCTTTGCCCTGTGGCAACCCTACAGC
TGCTGCCAGCGCCGCGGGCAGCGTTTCCTCTCCAGCACGGACTTTTGA

Protein sequence :
MQRPLLHGMPPEQPRLTLKSLSVAIMLTAASVPAANAALNSAQIVASAVSQACISWRVSGICYWLLCTPFGCKVRTSVKV
THYIPEAVVSAYNTQGGNPWREMSMVSQAAGGLESSITSGLSGVSAGGGNNELKTPGERKTNLHFKYADAIGHPATSLIG
GSIAGYSCRSAATPFVPYFLSTLDSLAWRTGIPESLYPEALVPGMREVGSQAAANMWGNVYPRSGFVTQVDDDKAGALVA
QRVADIITRSGQPHVYQLLMGQRSEGYWPPGAVTENTGTNNHKWQRLAPQLSQSCAVFPDGDHPPAADANAAFALWQPYS
CCQRRGQRFLSSTDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 6e-96 70
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 6e-96 70
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 4e-91 70
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 6e-88 70
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 1e-79 70
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 2e-90 69
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 2e-86 68
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 2e-69 52
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-63 50
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-65 50
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 3e-65 50
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-65 49
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-65 49
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 7e-58 48