Gene Information

Name : SerAS12_0294 (SerAS12_0294)
Accession : YP_004498765.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Unknown
Product : conjugative transfer region lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 340137 - 340562 bp
Length : 426 bp
Strand : +
Note : TIGRFAM: conjugative transfer region lipoprotein, TIGR03751 family; KEGG: spe:Spro_4170 putative lipoprotein

DNA sequence :
ATGCGGAAAAACCTATTTAACCGAGTCCTGGCTACCGCTGTCATGGTCAGCATCATGGCATTGGTCGGCTGCTCGACGTC
GAAAGAGGAAATGCTGCCACCGGGCGATAGCTCGATGCTGGAATTGTGGCAGGGTGATGACGGCGGTGGTTCGGCACGTA
ATGCGGTGGCGGCCCGAGACAGTCTGCGCCGGCCGCTCACCGACAGCGAAAGTCAGGCGACAGCGGCGGACGATCGCAGC
TACAGCCGCACCCAGGAAAGCGAAATCAGCCAGCAGTTCCCGCGGCTACCGAACCCTGACCTGGTGATGTATGTCTTTCC
GCATCTGGCGGACGGCAACGCACCGGTGCCGGGGTACAGCACCGTGTTCCCGTTCTACAGCCAGGTGCAGTATGCGATGC
CGGGTGAACGGACGGAGGCCTACTGA

Protein sequence :
MRKNLFNRVLATAVMVSIMALVGCSTSKEEMLPPGDSSMLELWQGDDGGGSARNAVAARDSLRRPLTDSESQATAADDRS
YSRTQESEISQQFPRLPNPDLVMYVFPHLADGNAPVPGYSTVFPFYSQVQYAMPGERTEAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 5e-39 67
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 5e-39 67
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 1e-34 61
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 3e-29 57
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 7e-34 57
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-35 56
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 7e-32 56
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-31 54
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-34 53
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 3e-34 52
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 8e-32 52
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 1e-33 51
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 1e-24 45