Gene Information

Name : SerAS12_0257 (SerAS12_0257)
Accession : YP_004498728.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Resistance
Product : Cation/acetate symporter ActP
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 301335 - 302987 bp
Length : 1653 bp
Strand : -
Note : TIGRFAM: Cation/acetate symporter ActP; Sodium/solute symporter, subgroup; HAMAP: Cation/acetate symporter ActP; KEGG: spe:Spro_0295 acetate permease; PFAM: Sodium/solute symporter

DNA sequence :
ATGAAGCGTTTATTGTCCGCCGTAACTCTGCTGGCTCTGCCGGGGTTGGCCTTTGCCGATGCCATTAGCGGTGAAGTACA
CCGCCAGCCGTTGAATATTCAGGCGATCGTCATGTTCGTGTTGTTTGTCGGCGCCACGTTGTATATCACCTATTGGGCCT
CCAAGCGCACCCGCTCGCGCCAGGACTACTACACCGCAGGGGGGAAAATCACCGGTCTGCAGAACGGTCTTGCCATCGCC
GGTGACTTTATGTCGGCGGCTTCTTTCCTGGGTATTTCCGCACTGGTATATACCTCTGGCTATGACGGGCTGATTTACTC
TATCGGCTTTTTGATCGGCTGGCCGATCATTTTGTTCCTGATTGCCGAACGCCTGCGTAACCTTGGCCGCTATACTTTCG
CTGACGTAGCCTCTTATCGTCTGAAGCAAAAACCGATCCGCACACTCTCTGCCTGCGGTTCACTGGTGGTAGTCGCGCTG
TATCTGATTGCTCAGATGGTCGGGGCCGGCAAGTTGATCCAGTTATTGTTCGGGTTGAACTACCACGTGGCGGTGATTTT
GGTCGGTATTTTGATGGTGTTGTACGTGCTGTTCGGCGGCATGCTGGCCACGACCTGGGTACAAATTATCAAAGCGGTGC
TGCTGCTGGCCGGTGCAAGCTTTATGGCTCTGATGGTGATGAAATCAGTCAACTTTGACTTCAACACCCTGTTCGCCGAA
GCCGTAAAAGTGCATCCGAAGGGTATCGCCATTATGAGCCCGGGTGGTTTGGTCTCCGATCCTATATCGGCGCTTTCCCT
GGGGCTGGCGCTGATGTTCGGTACCGCCGGGTTGCCGCATATTCTGATGCGCTTCTTTACCGTGAGTGACGCCAAGGAAG
CGCGTAAGAGCGTGTTCTATGCCACTGGTTTTATCGGCTACTTCTATATCCTGACCTTTATTATCGGTTTTGGCGCTATT
TTGCTGGTCAGCCCTAACCCGGCATTCAAAGATGCCACCGGTGCGCTGCTGGGCGGCACCAATATGGCGGCAGTGCATTT
AGCCAATGCAGTTGGCGGGAACTTCTTCCTTGGCTTTATCTCGGCAGTGGCCTTTGCCACCATCCTTGCGGTGGTTGCCG
GCCTGACGCTGGCAGGGGCATCTGCGGTATCTCACGACCTGTACGCTAGCGTAGTTAAAGATGGCAAGGCGACCGAACGT
GATGAGCTGCGGGTTTCCAAAATCACGGTAGTGATCCTGGGGATCGTGGCAATCGCGCTGGGAATTTTGTTTGAGAAGCA
GAATATCGCCTTTATGGTGGGACTGGCCTTCTCTATCGCTGCCAGCTGTAACTTCCCGATTATCATTCTTTCAATGTACT
GGTCACGCCTGACGACCCGTGGAGCGATGATCGGCGGCTGGCTGGGCTTGCTGACCGCAGTGATCCTGATGATCCTGGGC
CCGACGATTTGGGTGCAGATCCTTGGTCATGAAAAACCGATCTACCCTTATGAATATCCGGCGCTGTTCTCCATGCTGGT
GGCGTTTGTGGGTACCTGGTTGTTCTCAGCCACCGACAGTTCGCTAGCCGGGCAACAGGAGCGCGAGCGCTTCCGCTCTC
AGTTTGTACGTTCGCAAACCGGACTGGGCATCTCTCAGGGTAGTTCGCATTAA

Protein sequence :
MKRLLSAVTLLALPGLAFADAISGEVHRQPLNIQAIVMFVLFVGATLYITYWASKRTRSRQDYYTAGGKITGLQNGLAIA
GDFMSAASFLGISALVYTSGYDGLIYSIGFLIGWPIILFLIAERLRNLGRYTFADVASYRLKQKPIRTLSACGSLVVVAL
YLIAQMVGAGKLIQLLFGLNYHVAVILVGILMVLYVLFGGMLATTWVQIIKAVLLLAGASFMALMVMKSVNFDFNTLFAE
AVKVHPKGIAIMSPGGLVSDPISALSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGAI
LLVSPNPAFKDATGALLGGTNMAAVHLANAVGGNFFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVVKDGKATER
DELRVSKITVVILGIVAIALGILFEKQNIAFMVGLAFSIAASCNFPIIILSMYWSRLTTRGAMIGGWLGLLTAVILMILG
PTIWVQILGHEKPIYPYEYPALFSMLVAFVGTWLFSATDSSLAGQQERERFRSQFVRSQTGLGISQGSSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 5e-133 57
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 3e-78 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_0257 YP_004498728.1 Cation/acetate symporter ActP BAC0564 Protein 0.0 82
SerAS12_0257 YP_004498728.1 Cation/acetate symporter ActP BAC0570 Protein 1e-143 63