Gene Information

Name : SerAS12_2613 (SerAS12_2613)
Accession : YP_004501042.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2811030 - 2811533 bp
Length : 504 bp
Strand : +
Note : KEGG: spe:Spro_2616 thiol peroxidase; HAMAP: thiol peroxidase; PFAM: Redoxin

DNA sequence : 
ATGACTCAGACAGTACATTTCCAAGGCAACCCGGTCAGCGTTGCAGGCCATCTGCCACAGTCAGGCGAACAAGCCAAAGC
GTTCTCGTTGGTTGCCAAAGACCTGTCAGACGTAGCGCTAAGCAGCTTCGCGGGTAAACGCAAAGTCCTGAACATTTTCC
CAAGTATTGATACCGGCGTTTGCGCTGCCTCGGTACGTAAATTCAACCAACTGGCCAGCGGTCTGGATAATACCGTGGTG
CTGTGCATCTCCTCCGATCTGCCGTTCGCCCAGTCACGCTTCTGCGGCGCGGAAGGCCTGAGCAACGTAGTGACGCTGTC
CACCCTGCGTGGCGCTGAATTCAAACAGGCTTACGGCGTCGAAATCGCTGAAGGCCCGTTGGCGGGTCTGACTGCGCGTG
CAGTCGTGGTGCTGGATGGCCAGGACAATGTGCTGTACAGCGAGTTGGTGAATGAGATCACCAACGAGCCGGATTACGAT
GCTGCGCTGGCTGCACTGAAGTGA

Protein sequence : 
MTQTVHFQGNPVSVAGHLPQSGEQAKAFSLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLASGLDNTVV
LCISSDLPFAQSRFCGAEGLSNVVTLSTLRGAEFKQAYGVEIAEGPLAGLTARAVVVLDGQDNVLYSELVNEITNEPDYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-34 49
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 7e-35 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-34 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 5e-35 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_2613 YP_004501042.1 thiol peroxidase VFG0087 Protein 2e-35 49