Gene Information

Name : SerAS12_2072 (SerAS12_2072)
Accession : YP_004500506.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : phosphonate-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : 3.6.3.28
Position : 2226290 - 2227180 bp
Length : 891 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: spe:Spro_2132 ABC transporter-like protein; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACCACAGAGGTTTTTGTCCGCCCTGAGCTGATCGTGGATGACGTTACCGTTACCTATAACAACGGCCATACCGCGAT
CCACAACGCCAGTTTTAACCTGAGCGGCGGCGCCATTTGCGCGTTGGTCGGCGTCAACGGCAGCGGCAAGTCGACGCTGT
TCAAAAGCATCATGGGGCTGGTCAAACCCACCACCGGCCGTGTGCAGTTGAACGACAAACCGGTGGCGCAAGCGCTGAAA
AAAAATATTATTGCCTATGTCCCGCAAACCGAAGACGTCGACTGGAACTTCCCGGTCCTGGTGGAAGACGTAGTGATGAT
GGGCCGCTACGGCAAGATGAATTTTCTGCGCATCCCCTCCCGTGAAGACCGACTGCGCGTCGACAAGGCTCTGGAGCGCG
TTGGCCTGAGCGAACTGCGCACCCGCCAGATCGGCGAGCTTTCCGGTGGGCAGAAAAAACGGGTGTTCCTGGCGCGGGCG
CTGGCGCAACAAGGTTCCGTGCTGCTGCTGGATGAACCCTTCACCGGCGTGGACGTCAAAACCGAGAACGCAATTATCGA
TCTGCTGCGCGCGTTGCGTGATGAGGGTCACCTGATCCTGGTTTCCACCCATAACCTGGGCAGCGTGCCGGAATTCTGCG
ACCGGGTGATCCTGATTAACCGCACGGTGCTGGCCGCCGGCCCAACCGAAACCACCTTTACCCAAAGCAACCTGGAGCAG
GCGTTCGGCGGCGTGTTGCGCCATATCAACCTGTCCGGCCCGGATCTGCATGACGATAACGATCCGCGCACCGTGACGGT
ATTGACCGATGACGAACGTCCGGCGGTGTTCTATGGCCATACCAAGAGCGACCCTCCGGCGCAAAGCCAGCCAAAGGAGA
AGCAACTCTGA

Protein sequence : 
MTTEVFVRPELIVDDVTVTYNNGHTAIHNASFNLSGGAICALVGVNGSGKSTLFKSIMGLVKPTTGRVQLNDKPVAQALK
KNIIAYVPQTEDVDWNFPVLVEDVVMMGRYGKMNFLRIPSREDRLRVDKALERVGLSELRTRQIGELSGGQKKRVFLARA
LAQQGSVLLLDEPFTGVDVKTENAIIDLLRALRDEGHLILVSTHNLGSVPEFCDRVILINRTVLAAGPTETTFTQSNLEQ
AFGGVLRHINLSGPDLHDDNDPRTVTVLTDDERPAVFYGHTKSDPPAQSQPKEKQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-82 67
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-82 67
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-83 67
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-83 67
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-82 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_2072 YP_004500506.1 phosphonate-transporting ATPase BAC0440 Protein 6e-125 84
SerAS12_2072 YP_004500506.1 phosphonate-transporting ATPase BAC0350 Protein 2e-83 67
SerAS12_2072 YP_004500506.1 phosphonate-transporting ATPase BAC0400 Protein 1e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_2072 YP_004500506.1 phosphonate-transporting ATPase VFG0526 Protein 2e-83 67