Gene Information

Name : SerAS12_1953 (SerAS12_1953)
Accession : YP_004500388.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 2106451 - 2107155 bp
Length : 705 bp
Strand : +
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: spe:Spro_2002 lipoprotein transporter ATP-binding subunit; PFAM: ABC transporter-like

DNA sequence : 
ATGAGTAACCATCTTTTGCTGCAGTGCGAAAACCTGTGCAAGACCTATCAGGAAGGCAACCTGCATACCGACGTACTGCG
TAATGTCAGCTTTGCCATGCAGCCGGGTGAGATGATGGCGATTGTCGGCAGCTCGGGTTCCGGTAAAAGCACCCTGTTGC
ACCTGCTGGGCGGGCTGGATTCACCGACCTCCGGCGAAGTGATCTACAAAGGCCAGTCGCTGAATACCCTGTCGTCGGCG
GCCAAGGCTGAACTGCGCAACCGCCAGTTGGGCTTTATCTATCAGTTCCACCACCTGTTACCGGACTTTACCGCGTTGGA
AAACGCCGCGATGCCGCTGTTGATCGGCGGCATGAAACCGGCCCAGGCGCAGGACAAGGCGCTGGAAATGCTGACGGCGG
TCGGGCTGGAAAAACGCAGCAAACACCGGCCTTCGGAGCTGTCCGGCGGCGAGCGTCAACGCGTGGCGATCGCCCGTGCG
TTGGTGAATAACCCGTCGCTGGTGCTGGCGGACGAACCGACCGGCAACCTGGACAAACGCACCGCCGACAGCATCTTTGA
TCTGCTCGGTGAGCTGAACGTGCGTCAGGGCACCGCCTTCCTGGTGGTGACCCATGATCTGCAACTGGCCAAGCGTCTCA
GCCGTCAGCTGGAAATGGCCGACGGCCACCTGCAGGCGCAACTGACCCTGATGGGAGCCGAGTAA

Protein sequence : 
MSNHLLLQCENLCKTYQEGNLHTDVLRNVSFAMQPGEMMAIVGSSGSGKSTLLHLLGGLDSPTSGEVIYKGQSLNTLSSA
AKAELRNRQLGFIYQFHHLLPDFTALENAAMPLLIGGMKPAQAQDKALEMLTAVGLEKRSKHRPSELSGGERQRVAIARA
LVNNPSLVLADEPTGNLDKRTADSIFDLLGELNVRQGTAFLVVTHDLQLAKRLSRQLEMADGHLQAQLTLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_1953 YP_004500388.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 5e-40 47
SerAS12_1953 YP_004500388.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 5e-40 45
SerAS12_1953 YP_004500388.1 lipoprotein releasing system, ATP-binding protein CP001581.1.gene798.p Protein 2e-36 41