Gene Information

Name : SerAS12_1797 (SerAS12_1797)
Accession : YP_004500235.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1948340 - 1948996 bp
Length : 657 bp
Strand : +
Note : KEGG: spe:Spro_1848 response regulator; PFAM: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver region; Transcription regulator LuxR, C-terminal

DNA sequence : 
TTGATTAGCGTTCTTCTTGTTGATGACCACGAACTGGTGCGCGCAGGGATACGACGCATTCTTGAAGATATCAAAGGTAT
AAAAGTTGTCGGGGAGGCCCAGTGCGGTGAAGACGCCGTGAAATGGTGCCGTGGCAATGCTGTAGATATCGTTCTTATGG
ATATGAATATGCCGGGCATTGGCGGGCTGGAAGCTACGCGCAAGATTGTACGTTATGCGCCCGACGTTAAAGTCATCATG
TTGACTATTCATACTGAAAATCCATTGCCTGCCAAGGTGATGCAGGCAGGTGCTGCAGGTTACCTGAGTAAGGGGGCGGC
ACCGCAGGATGTGGTTAACGCCATCCGGTCGGTACAGGCAGGCCAGCGCTACATCGCATCGGACATTGCCCAGCAGATGG
CATTGAGCCAACTGGAACCGCAGACGGAAACCCCGTTCAGTTGCCTGTCTGAACGTGAACTGCAGATTATGCTGATGATC
ACCAAAGGCAAAAAGGTTAATGAGATCTCGGAACAACTGAACCTCAGTCCTAAAACGGTGAACAGTTACCGTTATCGTAT
GTTCAGTAAACTGAATATCAGCGGTGACGTCGAATTGACACACTTGGCTATCCGACACGGATTGTTCAATGCGGAGACGT
TGTTAAGCAGTGAGTGA

Protein sequence : 
MISVLLVDDHELVRAGIRRILEDIKGIKVVGEAQCGEDAVKWCRGNAVDIVLMDMNMPGIGGLEATRKIVRYAPDVKVIM
LTIHTENPLPAKVMQAGAAGYLSKGAAPQDVVNAIRSVQAGQRYIASDIAQQMALSQLEPQTETPFSCLSERELQIMLMI
TKGKKVNEISEQLNLSPKTVNSYRYRMFSKLNISGDVELTHLAIRHGLFNAETLLSSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-48 49
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-48 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_1797 YP_004500235.1 two component LuxR family transcriptional regulator VFG1889 Protein 2e-55 49