|
Name : SerAS12_1690 (SerAS12_1690) Accession : YP_004500129.1 Strain : Serratia sp. AS12 Genome accession: NC_015566 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1830117 - 1830866 bp Length : 750 bp Strand : + Note : PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: spe:Spro_1719 3-deoxy-manno-octulosonate cytidylyltransferase DNA sequence : ATGAGTTTTATCGCGATTATTCCAGCCCGTTACGCATCAACCCGTTTGCCGGGCAAACCCTTGGCCGATATTCACGGTAA GCCAATGGTGGTGCACGTAATGGAACGTGCACGTGAGTCCGGCGCCAGCCGCGTTATCGTAGCGACCGATCACCCCGAGG TGGCCGAAGCGGTCAAAGCCGCCGGTGGCGAAGTGTGCATGACCAGTCCGCATCACCATTCCGGCACCGAACGCCTGGCG GAAGTGATCGAGCACTATGGTTTTGCCGATGACGAAATCATCGTCAATGTGCAGGGTGACGAACCGATGATCCCGTCGGT GATCGTACGTCAGGTGGCAGAAAACCTGGCAGCCAGTCAGGCCGGCATGGCCACTCTTGCGGTACCGATCGACAGCGCGG AAGAAGCCTTTAACCCCAATGCCGTCAAAGTAGTGATGGATGCACAGGGTTATGCGCTCTATTTTTCACGCGCGACGATT CCCTGGGATCGGGAACGTTTTGCTCAATCCAAAGAAAGTATCGGCGACAGCTTGCTGCGCCACATCGGCATTTACGCCTA TCGTGCCGGGTTTGTACGCCGTTATGTCAGCTGGGCGCCAAGCCAACTGGAGCAAATTGAGCTGCTGGAGCAGCTGCGGG TGCTGTGGTACGGTGAAAAAATCCATGTGGGGGTCGCTAAAGCCATTCCAACCGTGGGTGTCGATACGCCGGAAGATCTG CAGCGCGTGCGCGACAGCATCAAGGGCTAA Protein sequence : MSFIAIIPARYASTRLPGKPLADIHGKPMVVHVMERARESGASRVIVATDHPEVAEAVKAAGGEVCMTSPHHHSGTERLA EVIEHYGFADDEIIVNVQGDEPMIPSVIVRQVAENLAASQAGMATLAVPIDSAEEAFNPNAVKVVMDAQGYALYFSRATI PWDRERFAQSKESIGDSLLRHIGIYAYRAGFVRRYVSWAPSQLEQIELLEQLRVLWYGEKIHVGVAKAIPTVGVDTPEDL QRVRDSIKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 1e-27 | 45 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 6e-27 | 45 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 5e-27 | 45 |
