Gene Information

Name : SerAS12_1599 (SerAS12_1599)
Accession : YP_004500041.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 1728015 - 1729160 bp
Length : 1146 bp
Strand : -
Note : PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; KEGG: spe:Spro_1626 cystathionine gamma-synthase

DNA sequence : 
ATGGCCAAGTTCGATACGTTGACCGTTCATGCCGGATACACCCCGGACGCCACCGGCGCAGTGATGCCGGCTATCTATGC
CACCTCGACCTACGCCCAACCGGCGCCGGGCGAGCACACCGGCTACGAATATTCACGCAGCGCCAACCCTACGCGCACCG
CGCTGGAAAGCGCCATCGCCGAGCTGGAAGGCGGCAGCCGCGGCTACGCCTTTGCCTCCGGCCTGGCGGCCTGCTCAACG
GTGCTGGAGCTGCTCGATCAGGGCAGCCATCTGGTGGCGGTCGACGATCTGTACGGCGGCACCTACCGCCTGCTGGAAAA
AGTGCGCAGCCGCACCGCCGGTTTACGCGTCACTTATGTTTCCCCGGCGGACATCGCCGCGCTGGAACAGGCGATAGAGC
CGGAGACCAAAATGATCTGGGTAGAAACGCCCACCAACCCGCTGTTGAAGCTGGCCGATCTGAGCGCCATTGCCGCTATC
GCCAAAAAACACGGGTTGATCAGCGTGGCGGACAACACTTTCGCCTCGCCGTATATTCAGCGACCGCTGGAGCTGGGATT
CGATGTGGTGGTGCATTCCGCCACCAAATACCTTAATGGACATTCCGACGTGGTGGCCGGGGTTGCCGCCGTGGGCGATA
ACGCAGAGTTGGCGGAACAGCTGGGCTTCCTGCAGAACGCCGTGGGCGGCATCCTCGATCCCTTCAGCAGCTTCCTGACG
CTACGCGGCATCCGTACACTGGCGCTGCGCATGGAGCGCCACAGCAACAGTGCATTGCGTATCGCCCAGTGGCTGGAAAC
CCAGCCGCAGGTGGAGGAGGTTTATTACCCAGGCCTGCCGAGCCACCCGCAGCACGCACTGGCGGCGAAGCAAATGAGCA
GCTTCGGGGGCATGATTTCGGTCCGGCTGAAAGGTGATGACGCCTTTGCGCGCCGGGTCATCAAGCGTTCGCAACTGTTC
ACCCTGGCGGAAAGCCTGGGCGGCGTTGAAAGCCTGATCAGCCAGCCATTCAGCATGACCCATGCGTCGATCCCGCTGGA
GCAGCGGCTGAAAACCGGCATCACGCCGCAGCTGCTGCGCCTGTCGGTGGGGATTGAGGATGTGGAAGATTTGATCGCCG
ATCTGCAACAGGCGCTGGCGGAATAA

Protein sequence : 
MAKFDTLTVHAGYTPDATGAVMPAIYATSTYAQPAPGEHTGYEYSRSANPTRTALESAIAELEGGSRGYAFASGLAACST
VLELLDQGSHLVAVDDLYGGTYRLLEKVRSRTAGLRVTYVSPADIAALEQAIEPETKMIWVETPTNPLLKLADLSAIAAI
AKKHGLISVADNTFASPYIQRPLELGFDVVVHSATKYLNGHSDVVAGVAAVGDNAELAEQLGFLQNAVGGILDPFSSFLT
LRGIRTLALRMERHSNSALRIAQWLETQPQVEEVYYPGLPSHPQHALAAKQMSSFGGMISVRLKGDDAFARRVIKRSQLF
TLAESLGGVESLISQPFSMTHASIPLEQRLKTGITPQLLRLSVGIEDVEDLIADLQQALAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-83 52
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-84 52
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 8e-54 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_1599 YP_004500041.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 1e-67 46