Gene Information

Name : SerAS12_1556 (SerAS12_1556)
Accession : YP_004500000.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Unknown
Product : polysaccharide export protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1596
EC number : -
Position : 1676468 - 1677604 bp
Length : 1137 bp
Strand : +
Note : PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: spe:Spro_1583 polysaccharide export protein

DNA sequence : 
ATGATAAATCCAAGATTTAAAGTTTTAGCAATTATTGTATCTGGAGCAATGTTGTCCGGTTGCACAGTCATCCCGGGTCA
GCATCTTAGTTCAGATAGCAAAAATATTGTTAAACAGGAAGATAGTGATTTTCGTATCGATGAATTGGTGAATGTCTATC
CAATGACACCAGGTCTCATTGCAAAACTGCGACCTGCCAAAATTATTGCCCAGCCAAATGCTTTATTGGAACAGGCAACT
AAAAGCTATGAGTATAAAATAGGTCCCGGCGATGTTTTAAACATCACAGTCTGGGATCATCCAGAACTTACAACTCCTGC
AGGGCAGTATCGTAGTGCCAGTGATACAGGTAACTGGGTGCAATCTGACGGAACGATTTTCTATCCCTATATCGGTAAAG
TGAACGTTGCAGGAAAAACTGCGGGTCAGGTGCGAAGCGAGATCTCTAACCGTTTGACACAGTATATCGAAAGCCCGCAG
GTCGATGTAAACATTGCAGCATTTAGGTCACAAAAAGCATATATAACAGGAGAAGTGGAAAAGTCTGGCCAGCAGGCGAT
TACTAATATCCCTCTAACTGTTTTAGATGCAATTAATGCTGCTGGAGGATTAAGTGCTAACGCTGATTGGCGTAATGTCG
TTCTGACTCATAATGGCAAGGAACAGATATTATCACTACAAAAACTTATGCAGAATGGGGACTTGACTCAAAACCAATTA
TTGTATCCTGGTGATATTGTTTATGTACCTCGTAATGATGAACTGAAAGTTTTTGTCATGGGTGAAGTTAAAACACCAGC
GACGTTAAAAATGGATCGCAGTGGTATGACATTAACTGAAGCCCTAGGCAATTCAGCAGGATTGGATCAGAATACATCCG
ATGCTACAGGGGTCTTTGTTATTCGTCCTCTGCGTGGAACTCAAGGAAAGAAAATAGCTGATATCTATCAGTTAAATATG
GCAGATGCTACCGCGATGGTGATGGGTACCGAATTCCACCTACAACCGTATGACATTGTTTATGTTACTGCTGCTCCGAT
TGTTCGTTGGAATCGTTTGATATCACAACTGGCACCTACTATATCTAGTTACAATAACCTAACTGAAGGTACATTACGTA
TTCGTAACTGGCCATAG

Protein sequence : 
MINPRFKVLAIIVSGAMLSGCTVIPGQHLSSDSKNIVKQEDSDFRIDELVNVYPMTPGLIAKLRPAKIIAQPNALLEQAT
KSYEYKIGPGDVLNITVWDHPELTTPAGQYRSASDTGNWVQSDGTIFYPYIGKVNVAGKTAGQVRSEISNRLTQYIESPQ
VDVNIAAFRSQKAYITGEVEKSGQQAITNIPLTVLDAINAAGGLSANADWRNVVLTHNGKEQILSLQKLMQNGDLTQNQL
LYPGDIVYVPRNDELKVFVMGEVKTPATLKMDRSGMTLTEALGNSAGLDQNTSDATGVFVIRPLRGTQGKKIADIYQLNM
ADATAMVMGTEFHLQPYDIVYVTAAPIVRWNRLISQLAPTISSYNNLTEGTLRIRNWP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 5e-129 68