Gene Information

Name : SerAS12_1494 (SerAS12_1494)
Accession : YP_004499939.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 1608092 - 1608550 bp
Length : 459 bp
Strand : -
Note : KEGG: spe:Spro_1523 AraC family transcriptional regulator; PFAM: Helix-turn-helix, AraC type; SMART: Helix-turn-helix, AraC domain

DNA sequence : 
ATGGATCGCGTCAATATCATTCACGATTTGCTGAACTGGATTGAAACTCATCTGGATCAACCGCTGCTGTTAGATAACGT
TGCGGCGAAATCGGGCTACTCCAAGTGGCACCTGCAAAGGATGTTCCGCAGCACCACCGGCCATGCGCTGGGCAGCTATA
TCCGCGAGCGCCGCCTGTCACAGGCCGCGCAGGCGCTGCGTTCGACCCCACGCCCTATTCTCGACATCGCCTTGCAGTTC
CATTTTGATTCCCAGCCGTCTTTTTCACGGGCGTTTAAAAAACAGTTCGGCAAAACGCCGGCGGTGTATCGCCGCACCAC
GCGTTGGGACGTGGTAGAGATGCGTCCGCAACCGATCGCGCCGCAGAACGGGCATCGGCACGAGTCGCCAGGCGCGCACT
TGTGGTATGCGGGGAAATGCGTGGATGGCGCCTGCACTCATTGGATGGGCCAGCGCTGA

Protein sequence : 
MDRVNIIHDLLNWIETHLDQPLLLDNVAAKSGYSKWHLQRMFRSTTGHALGSYIRERRLSQAAQALRSTPRPILDIALQF
HFDSQPSFSRAFKKQFGKTPAVYRRTTRWDVVEMRPQPIAPQNGHRHESPGAHLWYAGKCVDGACTHWMGQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 5e-29 54
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 5e-29 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_1494 YP_004499939.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 2e-29 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_1494 YP_004499939.1 AraC family transcriptional regulator VFG1038 Protein 2e-29 54