Gene Information

Name : SerAS12_0139 (SerAS12_0139)
Accession : YP_004498610.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 164137 - 165078 bp
Length : 942 bp
Strand : -
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Porphobilinogen deaminase; KEGG: spe:Spro_0178 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase

DNA sequence : 
ATGTTAGACAAAATTATTCGAATTGCCACCCGACAAAGCCCGCTAGCACTCTGGCAAGCACATTATGTGCAACAGCGCCT
GATGGCCAGCCACCCCGGCCTGCAGGTTGAACTGGTGCCAATGGTCACAAAGGGCGACATTATTCTGGATACGCCGCTGG
CGAAAGTCGGCGGTAAAGGCCTGTTTGTTAAAGAACTTGAGTTGGCGTTGCTGGAAGGCCGCGCCGATATCGCCGTCCAT
TCGATGAAAGACGTCCCGATAGATTTCCCCGCAGGCCTGGGCCTGGTGACCATTTGTGAGCGTGACGATCCGCGCGACGC
CTTTGTTTCCAATCGTTTTGCCTCGTTCGATCAGTTGCCGCAGGGCAGCGTGGTTGGCACCTCGAGCCTGCGCCGTCAGA
GCCAGTTGCGCGAACGCCGGCCGGATTTGATCGTGCGCGATTTGCGCGGCAACGTCGGTACCCGCCTGGCCAAGTTGGAT
AACGGTGATTACGACGCCATTATTCTGGCGGTCGCCGGGTTGAAACGCCTGGGGTTGGAGCAACGTATCCGCAGCCCATT
GAGCCCCGAAGAGTGCCTGCCGGCCGTCGGTCAGGGCGCGGTGGGCATCGAATGCCGTCTCGACGATGACGCCACCCGTG
CGCTGCTCGCACCGCTTAATCACACCGCAACCGATATCCGCGTGCGCGCTGAACGGGCGATGAATACGCGGCTGGAAGGC
GGTTGTCAGGTGCCGATCGGCAGCTATGCCGAACTGGAAGGCGACAGCCTGTGGCTGAGAGCCTTGGTCGGCTCACCGGA
CGGTAGCCAGATGGTGCGCGGCGAACGTCGCGGCCCGGCGGCCCTGGCCGAACAAATGGGCGTTGAGCTGGCGGAAGAAC
TGCTGGCGCGTGGCGCACGTGAAATCCTGCACGACGTTTATCAGGGAAATCCCTCGGCATGA

Protein sequence : 
MLDKIIRIATRQSPLALWQAHYVQQRLMASHPGLQVELVPMVTKGDIILDTPLAKVGGKGLFVKELELALLEGRADIAVH
SMKDVPIDFPAGLGLVTICERDDPRDAFVSNRFASFDQLPQGSVVGTSSLRRQSQLRERRPDLIVRDLRGNVGTRLAKLD
NGDYDAIILAVAGLKRLGLEQRIRSPLSPEECLPAVGQGAVGIECRLDDDATRALLAPLNHTATDIRVRAERAMNTRLEG
GCQVPIGSYAELEGDSLWLRALVGSPDGSQMVRGERRGPAALAEQMGVELAEELLARGAREILHDVYQGNPSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-82 63
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-82 63